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基于网络药理学和分子对接的机制研究揭示丹酚酸C在大鼠缺血性脑卒中模型中的保护作用

Network Pharmacology and Molecular Docking-Based Mechanism Study to Reveal the Protective Effect of Salvianolic Acid C in a Rat Model of Ischemic Stroke.

作者信息

Yang Yuting, He Yu, Wei Xiaoyu, Wan Haitong, Ding Zhishan, Yang Jiehong, Zhou Huifen

机构信息

Zhejiang Chinese Medical University, Hangzhou, China.

出版信息

Front Pharmacol. 2022 Jan 27;12:799448. doi: 10.3389/fphar.2021.799448. eCollection 2021.

Abstract

Salvianolic acid C (SAC) is a major bioactive component of (Danshen), a Chinese herb for treating ischemic stroke (IS). However, the mechanism by which SAC affects the IS has not yet been evaluated, thus a network pharmacology integrated molecular docking strategy was performed to systematically evaluate its pharmacological mechanisms, which were further validated in rats with cerebral ischemia. A total of 361 potential SAC-related targets were predicted by SwissTargetPrediction and PharmMapper, and a total of 443 IS-related targets were obtained from DisGeNET, DrugBank, OMIM, and Therapeutic Target database (TTD) databases. SAC-related targets were hit by the 60 targets associated with IS. By Gene ontology (GO) functional annotation and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment combined with the protein-protein interaction (PPI) network and cytoHubba plug-ins, nine related signaling pathways (proteoglycans in cancer, pathways in cancer, PI3K-Akt signaling pathway, Focal adhesion, etc.), and 20 hub genes were identified. Consequently, molecular docking indicated that SAC may interact with the nine targets (F2, MMP7, KDR, IGF1, REN, PPARG, PLG, ACE and MMP1). Four of the target proteins (VEGFR2, MMP1, PPARγ and IGF1) were verified using western blot. This study comprehensively analyzed pathways and targets related to the treatment of IS by SAC. The results of western blot also confirmed that the SAC against IS is mainly related to anti-inflammatory and angiogenesis, which provides a reference for us to find and explore the effective anti-IS drugs.

摘要

丹酚酸C(SAC)是丹参的一种主要生物活性成分,丹参是一种用于治疗缺血性中风(IS)的中草药。然而,SAC影响IS的机制尚未得到评估,因此采用网络药理学整合分子对接策略系统评估其药理机制,并在脑缺血大鼠中进一步验证。通过SwissTargetPrediction和PharmMapper预测了总共361个潜在的SAC相关靶点,并从DisGeNET、DrugBank、OMIM和治疗靶点数据库(TTD)数据库中获得了总共443个IS相关靶点。SAC相关靶点与60个与IS相关的靶点相匹配。通过基因本体(GO)功能注释和京都基因与基因组百科全书(KEGG)通路富集,结合蛋白质-蛋白质相互作用(PPI)网络和cytoHubba插件,确定了9条相关信号通路(癌症中的蛋白聚糖、癌症通路、PI3K-Akt信号通路、粘着斑等)和20个枢纽基因。因此,分子对接表明SAC可能与9个靶点(F2、MMP7、KDR、IGF1、REN、PPARG、PLG、ACE和MMP1)相互作用。使用蛋白质印迹法验证了4个靶蛋白(VEGFR2、MMP1、PPARγ和IGF1)。本研究全面分析了SAC治疗IS的相关通路和靶点。蛋白质印迹法的结果也证实了SAC抗IS主要与抗炎和血管生成有关,这为我们寻找和探索有效的抗IS药物提供了参考。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/60d3/8828947/e0c5d305d6a5/fphar-12-799448-g001.jpg

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