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用于胃癌检测的模块化即时呼吸分析仪及基于形状分类法的机器学习

Modular Point-of-Care Breath Analyzer and Shape Taxonomy-Based Machine Learning for Gastric Cancer Detection.

作者信息

Polaka Inese, Bhandari Manohar Prasad, Mezmale Linda, Anarkulova Linda, Veliks Viktors, Sivins Armands, Lescinska Anna Marija, Tolmanis Ivars, Vilkoite Ilona, Ivanovs Igors, Padilla Marta, Mitrovics Jan, Shani Gidi, Haick Hossam, Leja Marcis

机构信息

Institute of Clinical and Preventive Medicine, University of Latvia, LV-1586 Riga, Latvia.

Riga East University Hospital, LV-1038 Riga, Latvia.

出版信息

Diagnostics (Basel). 2022 Feb 14;12(2):491. doi: 10.3390/diagnostics12020491.

Abstract

BACKGROUND

Gastric cancer is one of the deadliest malignant diseases, and the non-invasive screening and diagnostics options for it are limited. In this article, we present a multi-modular device for breath analysis coupled with a machine learning approach for the detection of cancer-specific breath from the shapes of sensor response curves (taxonomies of clusters).

METHODS

We analyzed the breaths of 54 gastric cancer patients and 85 control group participants. The analysis was carried out using a breath analyzer with gold nanoparticle and metal oxide sensors. The response of the sensors was analyzed on the basis of the curve shapes and other features commonly used for comparison. These features were then used to train machine learning models using Naïve Bayes classifiers, Support Vector Machines and Random Forests.

RESULTS

The accuracy of the trained models reached 77.8% (sensitivity: up to 66.54%; specificity: up to 92.39%). The use of the proposed shape-based features improved the accuracy in most cases, especially the overall accuracy and sensitivity.

CONCLUSIONS

The results show that this point-of-care breath analyzer and data analysis approach constitute a promising combination for the detection of gastric cancer-specific breath. The cluster taxonomy-based sensor reaction curve representation improved the results, and could be used in other similar applications.

摘要

背景

胃癌是最致命的恶性疾病之一,其非侵入性筛查和诊断方法有限。在本文中,我们展示了一种用于呼吸分析的多模块设备,并结合机器学习方法,通过传感器响应曲线(聚类分类法)的形状来检测癌症特异性呼吸。

方法

我们分析了54名胃癌患者和85名对照组参与者的呼吸。使用带有金纳米颗粒和金属氧化物传感器的呼吸分析仪进行分析。根据曲线形状和其他常用的比较特征来分析传感器的响应。然后使用这些特征,通过朴素贝叶斯分类器、支持向量机和随机森林来训练机器学习模型。

结果

训练模型的准确率达到77.8%(灵敏度:高达66.54%;特异性:高达92.39%)。在大多数情况下,使用所提出的基于形状的特征提高了准确率,尤其是总体准确率和灵敏度。

结论

结果表明,这种即时护理呼吸分析仪和数据分析方法对于检测胃癌特异性呼吸构成了一种有前景的组合。基于聚类分类法的传感器反应曲线表示改善了结果,并且可用于其他类似应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f979/8871298/095d10e4079f/diagnostics-12-00491-g001.jpg

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