School of Molecular and Cellular Biology and Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, UK.
Centre for Cancer Genomics and Computational Biology, Barts Cancer Institute, Queen Mary University of London, London, UK.
EMBO Rep. 2022 May 4;23(5):e54117. doi: 10.15252/embr.202154117. Epub 2022 Mar 3.
Non-coding RNA (ncRNA) regulatory networks are emerging as critical regulators of gene expression. These intricate networks of ncRNA:ncRNA interactions modulate multiple cellular pathways and impact the development and progression of multiple diseases. Herpesviruses, including Kaposi's sarcoma-associated herpesvirus, are adept at utilising ncRNAs, encoding their own as well as dysregulating host ncRNAs to modulate virus gene expression and the host response to infection. Research has mainly focused on unidirectional ncRNA-mediated regulation of target protein-coding transcripts; however, we identify a novel host ncRNA regulatory network essential for KSHV lytic replication in B cells. KSHV-mediated upregulation of the host cell circRNA, circHIPK3, is a key component of this network, functioning as a competing endogenous RNA of miR-30c, leading to increased levels of the miR-30c target, DLL4. Dysregulation of this network highlights a novel mechanism of cell cycle control during KSHV lytic replication in B cells. Importantly, disruption at any point within this novel ncRNA regulatory network has a detrimental effect on KSHV lytic replication, highlighting the essential nature of this network and potential for therapeutic intervention.
非编码 RNA(ncRNA)调控网络正成为基因表达的关键调控因子。这些 ncRNA:ncRNA 相互作用的复杂网络调节多个细胞途径,并影响多种疾病的发展和进展。疱疹病毒,包括卡波西肉瘤相关疱疹病毒,善于利用 ncRNA,编码自身以及失调宿主 ncRNA 来调节病毒基因表达和宿主对感染的反应。研究主要集中在 ncRNA 对靶蛋白编码转录物的单向调控上;然而,我们确定了一个新的宿主 ncRNA 调控网络,该网络对于 B 细胞中的 KSHV 裂解复制至关重要。KSHV 介导的宿主细胞 circRNA circHIPK3 的上调是该网络的关键组成部分,作为 miR-30c 的竞争性内源性 RNA,导致 miR-30c 靶标 DLL4 的水平增加。该网络的失调突出了 B 细胞中 KSHV 裂解复制过程中细胞周期控制的新机制。重要的是,在这个新的 ncRNA 调控网络中的任何一个点的破坏都会对 KSHV 裂解复制产生有害影响,这突出了该网络的重要性及其潜在的治疗干预作用。