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艰难梭菌在中东和远东的流行病学。

Clostridioides difficile epidemiology in the Middle and the Far East.

机构信息

Department of Medical Microbiology, 2nd Faculty of Medicine, Charles University and Motol University Hospital, Czech Republic.

Department of Medical Microbiology, 2nd Faculty of Medicine, Charles University and Motol University Hospital, Czech Republic; Department of Genetics and Microbiology, Faculty of Science, Charles University, Czech Republic.

出版信息

Anaerobe. 2022 Apr;74:102542. doi: 10.1016/j.anaerobe.2022.102542. Epub 2022 Feb 28.

Abstract

OBJECTIVES

Clostridioides difficile is an important pathogen of healthcare-associated gastrointestinal infections. Recently, an increased number of C. difficile infection (CDI) surveillance data has been reported from Asia. The aim of this review is to summarize the data on the prevalence, distribution and molecular epidemiology of CDI in the Middle and the Far East.

METHODS

Literature was drawn from a search of PubMed up to September 30, 2021.

RESULTS

The meta-analysis of data from 111 studies revealed the pooled CDI prevalence rate in the Middle and the Far East of 12.4% (95% CI 11.4-13.3); 48 studies used PCR for CDI laboratory diagnoses. The predominant types (RT)/sequence type (ST) differ between individual countries (24 studies, 14 countries). Frequently found RTs were 001, 002, 012, 017, 018 and 126; RT017 was predominant in the Far East. The epidemic RT027 was detected in 8 countries (22 studies), but its predominance was reported only in three studies (Israel and Iran). The contamination of vegetable and meat or meat products and/or intestinal carriage of C. difficile in food and companion animals have been reported; the C. difficile RTs/STs identified overlapped with those identified in humans.

CONCLUSIONS

A large number of studies on CDI prevalence in humans from the Middle and the Far East have been published; countries with no available data were identified. The number of studies on C. difficile from non-human sources is limited. Comparative genomic studies of isolates from different sources are needed.

摘要

目的

艰难梭菌是一种重要的医源性胃肠道感染病原体。最近,亚洲地区报告了越来越多的艰难梭菌感染(CDI)监测数据。本综述的目的是总结中东海湾地区 CDI 的流行率、分布和分子流行病学数据。

方法

通过检索 PubMed 数据库,检索截至 2021 年 9 月 30 日的文献。

结果

对 111 项研究的数据进行荟萃分析显示,中东海湾地区 CDI 的总体流行率为 12.4%(95%CI 11.4-13.3);48 项研究使用 PCR 进行 CDI 实验室诊断。不同国家(24 项研究,14 个国家)的主要流行株(RT)/序列型(ST)不同。经常发现的 RT 型为 001、002、012、017、018 和 126;RT017 在远东地区占优势。在 8 个国家(22 项研究)中检测到流行 RT027,但仅在 3 项研究(以色列和伊朗)中报告其占优势。已报告蔬菜和肉类或肉类产品以及/或食源性和伴侣动物肠道艰难梭菌的污染;鉴定出的艰难梭菌 RT/ST 与在人类中鉴定出的 RT/ST 重叠。

结论

已发表了大量关于中东海湾地区人类 CDI 流行率的研究;确定了尚无可用数据的国家。关于非人类来源艰难梭菌的研究数量有限。需要对来自不同来源的分离株进行比较基因组研究。

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