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基于量子化学计算和机器学习从头创建一种肉眼可检测的荧光分子。

De novo creation of a naked eye-detectable fluorescent molecule based on quantum chemical computation and machine learning.

作者信息

Sumita Masato, Terayama Kei, Suzuki Naoya, Ishihara Shinsuke, Tamura Ryo, Chahal Mandeep K, Payne Daniel T, Yoshizoe Kazuki, Tsuda Koji

机构信息

RIKEN Center for Advanced Intelligence Project, 1-4-1 Nihonbashi, Chuo-ku, Tokyo 103-0027, Japan.

International Center for Materials Nanoarchitectonics (WPI-MANA), National Institute for Materials Science, 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan.

出版信息

Sci Adv. 2022 Mar 11;8(10):eabj3906. doi: 10.1126/sciadv.abj3906. Epub 2022 Mar 9.

DOI:10.1126/sciadv.abj3906
PMID:35263133
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8906732/
Abstract

Designing fluorescent molecules requires considering multiple interrelated molecular properties, as opposed to properties that straightforwardly correlated with molecular structure, such as light absorption of molecules. In this study, we have used a de novo molecule generator (DNMG) coupled with quantum chemical computation (QC) to develop fluorescent molecules, which are garnering significant attention in various disciplines. Using massive parallel computation (1024 cores, 5 days), the DNMG has produced 3643 candidate molecules. We have selected an unreported molecule and seven reported molecules and synthesized them. Photoluminescence spectrum measurements demonstrated that the DNMG can successfully design fluorescent molecules with 75% accuracy ( = 6/8) and create an unreported molecule that emits fluorescence detectable by the naked eye.

摘要

设计荧光分子需要考虑多个相互关联的分子性质,这与那些直接与分子结构相关的性质不同,比如分子的光吸收。在本研究中,我们使用了一个从头分子生成器(DNMG)结合量子化学计算(QC)来开发荧光分子,这类分子在各个学科中都备受关注。通过大规模并行计算(1024个核心,5天),DNMG生成了3643个候选分子。我们挑选了一个未报道过的分子和七个已报道的分子并进行了合成。光致发光光谱测量表明,DNMG能够以75%的准确率( = 6/8)成功设计荧光分子,并创造出一种肉眼可检测到荧光发射的未报道过的分子。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc7b/8906732/038372f5d2d5/sciadv.abj3906-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc7b/8906732/6fb6501dfbd5/sciadv.abj3906-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc7b/8906732/a0cf33f7b071/sciadv.abj3906-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc7b/8906732/3876b280905c/sciadv.abj3906-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc7b/8906732/9a84046b923c/sciadv.abj3906-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc7b/8906732/78b02cd443c4/sciadv.abj3906-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc7b/8906732/038372f5d2d5/sciadv.abj3906-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc7b/8906732/6fb6501dfbd5/sciadv.abj3906-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc7b/8906732/a0cf33f7b071/sciadv.abj3906-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc7b/8906732/3876b280905c/sciadv.abj3906-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc7b/8906732/9a84046b923c/sciadv.abj3906-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc7b/8906732/78b02cd443c4/sciadv.abj3906-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc7b/8906732/038372f5d2d5/sciadv.abj3906-f6.jpg

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