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不同盐水平下野生和栽培大麦中NHX型钠/氢逆向转运蛋白基因表达及等位基因多样性

NHX-Type Na/H Antiporter Gene Expression Under Different Salt Levels and Allelic Diversity of in Wild and Cultivated Barleys.

作者信息

Jabeen Zahra, Irshad Faiza, Hussain Nazim, Han Yong, Zhang Guoping

机构信息

Department of Biosciences, COMSATS University Islamabad (CUI), Islamabad, Pakistan.

Department of Agronomy, Institute of Crop Science, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China.

出版信息

Front Genet. 2022 Feb 22;12:809988. doi: 10.3389/fgene.2021.809988. eCollection 2021.

Abstract

Salinity tolerance is a multifaceted trait attributed to various mechanisms. Wild barley is highly specialized to grow under severe environmental conditions of Tibet and is well-known for its diverse germplasm with high tolerance to abiotic stresses. The present study focused on determining the profile of the expression of isoforms of the gene in 36 wild and two cultivated barley under salt stress. Our findings revealed that in leaves and roots, expression of and in XZ16 and CM72 was upregulated at all times as compared with sensitive ones. The and isoforms were also induced by salt stress, although not to the same extent as and Gene expression analysis revealed that and are the candidate genes that could have the function of regulators of ions by sequestration of Na in the vacuole. and showed a wide range of sequence variations in an amplicon, identified single-nucleotide polymorphisms (SNPs). Evaluation of the sequencing data of 38 barley genotypes, including Tibetan wild and cultivated varieties, showed polymorphisms, including SNPs, and small insertion and deletion (INDEL) sites in the targeted genes and . Comprehensive analysis of the results revealed that Tibetan wild barley has distinctive alleles of and which confer tolerance to salinity. Furthermore, less sodium accumulation was observed in the root of XZ16 than the other genotypes as visualized by CoroNa-Green, a sodium-specific fluorophore. XZ16 is the tolerant genotype, showing least reduction of root and leaf dry weight under moderate (150 mM) and severe (300 mM) NaCl stress. Evaluation of genetic variation and identification of salt tolerance mechanism in wild barley could be promoting approaches to unravel the novel alleles involved in salinity tolerance.

摘要

耐盐性是一个归因于多种机制的多方面性状。野生大麦非常适应在西藏的恶劣环境条件下生长,并且以其对非生物胁迫具有高耐受性的多样种质而闻名。本研究聚焦于确定36份野生大麦和2份栽培大麦在盐胁迫下该基因同工型的表达谱。我们的研究结果表明,在叶片和根中,与敏感品种相比,XZ16和CM72中的[具体基因名称1]和[具体基因名称2]的表达在所有时间均上调。[具体基因名称3]和[具体基因名称4]同工型也受到盐胁迫诱导,尽管程度不如[具体基因名称1]和[具体基因名称2]。基因表达分析表明,[具体基因名称1]和[具体基因名称2]是可能通过将Na隔离在液泡中来发挥离子调节功能的候选基因。[具体基因名称1]和[具体基因名称2]在一个扩增子中显示出广泛的序列变异,鉴定出[X]个单核苷酸多态性(SNP)。对38个大麦基因型(包括西藏野生和栽培品种)的测序数据评估显示,目标基因[具体基因名称1]和[具体基因名称2]存在多态性,包括SNP以及小的插入和缺失(INDEL)位点。对结果的综合分析表明,西藏野生大麦具有赋予耐盐性的[具体基因名称1]和[具体基因名称2]的独特等位基因。此外,通过钠特异性荧光团CoroNa - Green可视化观察到,XZ16根中的钠积累量比其他基因型少。XZ16是耐盐基因型,在中度(150 mM)和重度(300 mM)NaCl胁迫下,根和叶干重的减少最少。评估野生大麦中的遗传变异并鉴定其耐盐机制可能是揭示参与耐盐性的新等位基因的有效方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3dd2/8902669/f5e4bfdcd049/fgene-12-809988-g001.jpg

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