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全细胞 SELEX 筛选技术的研究进展及其在细胞靶向适配体中的应用。

Research progress of whole-cell-SELEX selection and the application of cell-targeting aptamer.

机构信息

School of Marine Science and Technology, Shandong, Harbin Institute of Technology (Weihai), Wenhua West Road, 2#, Weihai, 264209, People's Republic of China.

School of Environment, Harbin Institute of Technology, Harbin, 150090, People's Republic of China.

出版信息

Mol Biol Rep. 2022 Aug;49(8):7979-7993. doi: 10.1007/s11033-022-07317-0. Epub 2022 Mar 10.

Abstract

BACKGROUND

Aptamers refer to the artificially synthesized nucleic acid sequences (DNA/RNA) that can bind to a wide range of targets with high affinity and specificity, which are generally generated from systematic evolution of ligands by exponential enrichment (SELEX). As a novel method of aptamers screening, whole-cell-SELEX (WC-SELEX) has gained more and more attention in many fields such as biomedicine, analytical chemistry, and molecular diagnostics due to its ability to screen multiple potential aptamers without knowing the detailed structural information of target molecules.

METHODS AND RESULTS

In recent years, with the deepening of research on application of aptamers, the traditional WC-SELEX cannot meet the practical application because of long experimental period, complicated operation process and low specificity, etc. Therefore, the development of more efficient methods for screening aptamer is always on the road. This paper summarizes the current research status of WC-SELEX for bacteria, parasites and animal cells, and reviews the latest advances of WC-SELEX techniques that are dependent on novel instruments, materials and microelectronics, including fluorescence-activated cell sorting-assisted SELEX, three-dimensional assisted WC-SELEX, and microfluidic chip system-assisted WC-SELEX. In addition, the application of aptamers targeting cells was discussed.

CONCLUSION

Taken together, this review is aimed at providing a reference for WC-SELEX selection and application of aptamer targeting cells.

摘要

背景

适体是指可以与广泛的目标物结合的人工合成的核酸序列(DNA/RNA),具有高亲和力和特异性,通常通过指数富集配体系统进化(SELEX)从众多候选序列中筛选得到。作为一种新的适体筛选方法,全细胞 SELEX(WC-SELEX)由于能够在不了解靶分子详细结构信息的情况下筛选出多个潜在的适体,因此在生物医学、分析化学和分子诊断等多个领域受到越来越多的关注。

方法与结果

近年来,随着适体应用研究的不断深入,由于实验周期长、操作过程复杂、特异性低等原因,传统的 WC-SELEX 已不能满足实际应用的需要。因此,筛选适体的更有效的方法一直在不断发展。本文综述了用于细菌、寄生虫和动物细胞的 WC-SELEX 的研究现状,介绍了依赖于新型仪器、材料和微电子技术的 WC-SELEX 技术的最新进展,包括荧光激活细胞分选辅助 SELEX、三维辅助 WC-SELEX 和微流控芯片系统辅助 WC-SELEX。此外,还讨论了针对细胞的适体的应用。

结论

综上所述,本文旨在为针对细胞的适体的 WC-SELEX 选择和应用提供参考。

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