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利用分类多样且代谢多样的副球菌属进行生物塑料合成和异生物质生物降解。

Harnessing taxonomically diverse and metabolically versatile genus Paracoccus for bioplastic synthesis and xenobiotic biodegradation.

机构信息

Department of Zoology, University of Delhi, Delhi, India.

出版信息

J Appl Microbiol. 2022 Jun;132(6):4208-4224. doi: 10.1111/jam.15530. Epub 2022 Mar 29.

Abstract

The genus Paracoccus represents a taxonomically diverse group comprising more than 80 novel species isolated from various pristine and polluted environments. The species are characterized as coccoid-shaped Gram-negative bacteria with versatile metabolic attributes and classified as autotrophs, heterotrophs and/or methylotrophs. The present study highlights the up-to-date global taxonomic diversity and critically discusses the significance of genome analysis for identifying the genomic determinants related to functional attributes mainly bioplastic synthesis and biodegradation potential that makes these isolates commercially viable. The analysis accentuates polyphasic and genomic attributes of Paracoccus spp. which could be harnessed for commercial applications and emphasizes the need of integrating genome-based computational analysis for evolutionary species and functional diversification. The work reflects on the underexplored genetic potential for bioplastic synthesis which can be harnessed using advanced genomic methods. It also underlines the degradation potential and possible use of naturally-occurring pollutant-degrading Paracoccus isolates for the development of a biodegradation system and efficient removal of contaminants. The work contemplates plausible use of such potent isolates to establish the plant-microbe interaction, contributing toward contaminated land reclamation. Overall, the work signifies the need and application of genome analysis to identify and explore the prospective potential of Paracoccus spp. for environmental application toward achieving sustainability.

摘要

副球菌属代表了一个分类多样的群体,包含了 80 多种从各种原始和污染环境中分离出来的新物种。这些物种的特征是球形革兰氏阴性细菌,具有多样的代谢属性,被分类为自养型、异养型和/或甲基营养型。本研究强调了副球菌属的最新全球分类多样性,并批判性地讨论了基因组分析在识别与功能属性相关的基因组决定因素方面的重要性,这些功能属性主要与生物塑料合成和生物降解潜力有关,使这些分离物具有商业可行性。该分析强调了副球菌属的多相和基因组属性,这些属性可以被用于商业应用,并强调了需要整合基于基因组的计算分析,以进行进化物种和功能多样化的研究。该工作反映了对生物塑料合成的遗传潜力的探索不足,可以利用先进的基因组方法来利用这些潜力。它还强调了自然存在的污染物降解副球菌分离物的降解潜力和可能的用途,用于开发生物降解系统和有效去除污染物。该工作考虑了合理使用这些有效分离物来建立植物-微生物相互作用,为污染土地的开垦做出贡献。总的来说,这项工作表明了需要进行基因组分析,以识别和探索副球菌属在环境应用方面的潜在应用,以实现可持续性。

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