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铜绿假单胞菌合作群体中群体感应调控基因的进化。

Evolution of the Quorum Sensing Regulon in Cooperating Populations of Pseudomonas aeruginosa.

机构信息

Department of Medicine, University of Washingtongrid.34477.33, Seattle, Washington, USA.

Department of Microbiology, University of Washingtongrid.34477.33, Seattle, Washington, USA.

出版信息

mBio. 2022 Feb 22;13(1):e0016122. doi: 10.1128/mbio.00161-22.

Abstract

In the opportunistic pathogenic bacterium Pseudomonas aeruginosa acyl-homoserine lactone quorum sensing (QS) can activate expression of dozens to hundreds of genes depending on the strain under investigation. Many QS-activated genes code for extracellular products. P. aeruginosa has become a model for studies of cell-cell communication and coordination of cooperative activities, which result from production of extracellular products. We hypothesized that strain variation in the size of the QS regulon might reflect the environmental history of an isolate. We tested the hypothesis by performing long-term growth experiments with the well-studied strain PAO1, which has a relatively large QS regulon, under conditions where only limited QS-controlled functions are required. We grew P. aeruginosa for about 1000 generations in a condition where expression of QS-activated genes was required, and emergence of QS mutants was constrained and compared the QS regulons of populations after 35 generations to those after about 1000 generations in two independent lineages by using quorum quenching and RNA-seq technology. In one lineage the number of QS-activated genes identified was reduced by over 60% and in the other by about 30% in 1000-generation populations compared to 35-generation populations. Our results provide insight about the variations in the number of QS-activated genes reported for different P. aeruginosa environmental and clinical isolates and, about how environmental conditions might influence social evolution. Pseudomonas aeruginosa uses quorum sensing (QS) to activate expression of dozens of genes (the QS regulon). Because there is strain-to-strain variation in the size and content of the QS regulon, we asked how the regulon might evolve during long-term P. aeruginosa growth when cells require some but not all the functions activated by QS. We demonstrate that the P. aeruginosa QS-regulon can undergo a reductive adaptation in response to continuous QS-dependent growth. Our results provide insights into why there is strain-to-strain variability in the size and content of the P. aeruginosa QS regulon.

摘要

在机会致病细菌铜绿假单胞菌中,酰基高丝氨酸内酯群体感应 (QS) 可以根据所研究的菌株激活数十到数百个基因的表达。许多 QS 激活的基因编码细胞外产物。铜绿假单胞菌已成为细胞间通讯和合作活动协调研究的模型,这些活动是由细胞外产物的产生引起的。我们假设 QS 调节子大小的菌株变异可能反映分离物的环境历史。我们通过用经过充分研究的菌株 PAO1 进行长期生长实验来检验这一假设,该菌株具有相对较大的 QS 调节子,但在仅需要有限的 QS 控制功能的条件下进行。我们在需要表达 QS 激活基因的条件下让铜绿假单胞菌生长了大约 1000 代,并且限制了 QS 突变体的出现,并通过使用群体感应淬灭和 RNA-seq 技术比较了两个独立谱系中 35 代和大约 1000 代的种群的 QS 调节子。在一个谱系中,与 35 代种群相比,1000 代种群中鉴定出的 QS 激活基因数量减少了超过 60%,而在另一个谱系中减少了约 30%。我们的研究结果提供了关于不同铜绿假单胞菌环境和临床分离物报告的 QS 激活基因数量的变化的见解,以及环境条件如何影响社会进化。铜绿假单胞菌使用群体感应 (QS) 来激活数十个基因(QS 调节子)的表达。由于 QS 调节子的大小和内容在菌株之间存在差异,我们想知道当细胞需要 QS 激活的一些但不是所有功能时,QS 调节子在铜绿假单胞菌的长期生长过程中如何进化。我们证明,铜绿假单胞菌的 QS 调节子可以通过对连续的 QS 依赖生长进行还原适应来进化。我们的研究结果提供了关于为什么铜绿假单胞菌 QS 调节子的大小和内容在菌株之间存在差异的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3aaa/8863103/a2e37541856a/mbio.00161-22-f001.jpg

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