• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于蛋白质半合成的策略研究连接组蛋白丝氨酸 ADP-核糖基化的功能影响。

A Protein Semisynthesis-Based Strategy to Investigate the Functional Impact of Linker Histone Serine ADP-Ribosylation.

机构信息

Department of Biochemistry, University of Texas Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, Texas 75390-9038, United States.

Departments of Biophysics and Microbiology, University of Texas Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, Texas 75390-9038, United States.

出版信息

ACS Chem Biol. 2022 Apr 15;17(4):810-815. doi: 10.1021/acschembio.2c00091. Epub 2022 Mar 21.

DOI:10.1021/acschembio.2c00091
PMID:35312285
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10202128/
Abstract

Recently developed chemical and enzyme-based technologies to install serine ADP-ribosylation onto synthetic peptides have enabled new approaches to study poly(ADP-ribose) polymerase (PARP) biology. Here, we establish a generalizable strategy to prepare ADP-ribosylated peptides that are compatible with N-terminal, C-terminal, and sequential protein ligation reactions. Two unique protein-assembly routes are employed to generate full-length linker histone constructs that are homogeneously ADP-ribosylated at known DNA damage-dependent modification sites. We found that serine mono-ADP-ribosylation is sufficient to alleviate linker histone-dependent chromatin compaction and that this effect is amplified by ADP-ribose chain elongation. Our work will greatly expand the scope of ADP-ribose-modified proteins that can be constructed via semisynthesis, which is rapidly emerging as a robust approach to elucidate the direct effects that site-specific serine mono- and poly-ADP-ribosylation have on protein function.

摘要

最近开发的化学和酶基技术可将丝氨酸 ADP-核糖基化安装到合成肽上,为研究聚(ADP-核糖)聚合酶(PARP)生物学开辟了新途径。在这里,我们建立了一种可普遍应用的策略来制备 ADP-核糖基化肽,这些肽与 N 端、C 端和顺序蛋白连接反应兼容。采用两种独特的蛋白质组装途径来生成全长连接组蛋白构建体,这些构建体在已知的 DNA 损伤依赖性修饰位点处均一 ADP-核糖基化。我们发现丝氨酸单 ADP-核糖基化足以减轻连接组蛋白依赖性染色质紧缩,并且这种效应通过 ADP-核糖链延伸而放大。我们的工作将大大扩展可以通过半合成构建的 ADP-核糖修饰蛋白的范围,这是一种迅速发展的强大方法,可以阐明特定丝氨酸单和多 ADP-核糖基化对蛋白质功能的直接影响。

相似文献

1
A Protein Semisynthesis-Based Strategy to Investigate the Functional Impact of Linker Histone Serine ADP-Ribosylation.基于蛋白质半合成的策略研究连接组蛋白丝氨酸 ADP-核糖基化的功能影响。
ACS Chem Biol. 2022 Apr 15;17(4):810-815. doi: 10.1021/acschembio.2c00091. Epub 2022 Mar 21.
2
Serine ADP-ribosylation marks nucleosomes for ALC1-dependent chromatin remodeling.丝氨酸 ADP-ribosylation 标记核小体,以依赖于 ALC1 的染色质重塑。
Elife. 2021 Dec 7;10:e71502. doi: 10.7554/eLife.71502.
3
Chemoenzymatic and Synthetic Approaches To Investigate Aspartate- and Glutamate-ADP-Ribosylation.化学酶法和合成方法研究天冬氨酸和谷氨酸的 ADP-核糖基化。
J Am Chem Soc. 2023 Jun 28;145(25):14000-14009. doi: 10.1021/jacs.3c03771. Epub 2023 Jun 14.
4
Nuclear ADP-ribosylation reactions in mammalian cells: where are we today and where are we going?哺乳动物细胞中的核ADP-核糖基化反应:我们如今处于何方,又将走向何处?
Microbiol Mol Biol Rev. 2006 Sep;70(3):789-829. doi: 10.1128/MMBR.00040-05.
5
Site-specific ADP-ribosylation of histone H2B in response to DNA double strand breaks.针对 DNA 双链断裂的组蛋白 H2B 的位点特异性 ADP-ribosylation。
Sci Rep. 2017 Mar 2;7:43750. doi: 10.1038/srep43750.
6
Reversible mono-ADP-ribosylation of DNA breaks.DNA断裂的可逆单ADP核糖基化
FEBS J. 2017 Dec;284(23):4002-4016. doi: 10.1111/febs.14297. Epub 2017 Nov 8.
7
Serine ADP-Ribosylation Depends on HPF1.丝氨酸ADP核糖基化依赖于HPF1。
Mol Cell. 2017 Mar 2;65(5):932-940.e6. doi: 10.1016/j.molcel.2017.01.003. Epub 2017 Feb 9.
8
Functional Analysis of Histone ADP-Ribosylation In Vitro and in Cells.组蛋白ADP-核糖基化在体外和细胞中的功能分析
Methods Mol Biol. 2023;2609:157-192. doi: 10.1007/978-1-0716-2891-1_11.
9
Relation between carcinogenesis, chromatin structure and poly(ADP-ribosylation) (review).致癌作用、染色质结构与多(ADP-核糖基化)之间的关系(综述)
Anticancer Res. 1991 Mar-Apr;11(2):489-527.
10
Poly(ADP-ribosylated) histones in chromatin replication.染色质复制中的聚(ADP-核糖基化)组蛋白
J Biol Chem. 1990 Aug 25;265(24):14638-47.

引用本文的文献

1
Single nucleosome imaging reveals principles of transient multiscale chromatin reorganization triggered by histone ADP-ribosylation at DNA lesions.单核小体成像揭示了DNA损伤处组蛋白ADP核糖基化引发的瞬时多尺度染色质重组原理。
Nat Commun. 2025 Jul 19;16(1):6652. doi: 10.1038/s41467-025-61834-7.
2
Convergent Approach Toward ADP-Ribosylated Peptides via a Chemoselective Phosphate Condensation.通过化学选择性磷酸缩合对ADP-核糖基化肽的收敛方法。
Chemistry. 2025 Jul 8;31(38):e202501383. doi: 10.1002/chem.202501383. Epub 2025 Jun 16.
3
Post-translational activation of the C-terminus of polypeptides for the synthesis of peptide thioesters and peptide thioester surrogates.用于合成肽硫酯和肽硫酯替代物的多肽C末端的翻译后激活。
Front Chem. 2024 Jul 15;12:1424953. doi: 10.3389/fchem.2024.1424953. eCollection 2024.
4
Mono-ADP-Ribosylation of Peptides: An Overview of Synthetic and Chemoenzymatic Methodologies.肽的单磷酸腺苷核糖基化:合成及化学酶法概述
Chembiochem. 2024 Dec 16;25(24):e202400440. doi: 10.1002/cbic.202400440. Epub 2024 Sep 5.
5
PARticular MARks: Histone ADP-ribosylation and the DNA damage response.特殊标记:组蛋白 ADP-ribosylation 和 DNA 损伤反应。
DNA Repair (Amst). 2024 Aug;140:103711. doi: 10.1016/j.dnarep.2024.103711. Epub 2024 Jun 22.
6
Asymmetric nucleosome PARylation at DNA breaks mediates directional nucleosome sliding by ALC1.DNA 断裂处非对称核小体 PAR 化介由 ALC1 介导定向核小体滑动。
Nat Commun. 2024 Feb 2;15(1):1000. doi: 10.1038/s41467-024-45237-8.
7
Chemoenzymatic and Synthetic Approaches To Investigate Aspartate- and Glutamate-ADP-Ribosylation.化学酶法和合成方法研究天冬氨酸和谷氨酸的 ADP-核糖基化。
J Am Chem Soc. 2023 Jun 28;145(25):14000-14009. doi: 10.1021/jacs.3c03771. Epub 2023 Jun 14.
8
PARPs and ADP-ribosylation: Deciphering the complexity with molecular tools.聚腺苷二磷酸核糖聚合酶和 ADP-核糖基化:用分子工具破解复杂性。
Mol Cell. 2023 May 18;83(10):1552-1572. doi: 10.1016/j.molcel.2023.04.009. Epub 2023 Apr 28.
9
Nature-inspired protein ligation and its applications.受自然启发的蛋白质连接及其应用。
Nat Rev Chem. 2023 Apr;7(4):234-255. doi: 10.1038/s41570-023-00468-z. Epub 2023 Feb 21.
10
Modular antibodies reveal DNA damage-induced mono-ADP-ribosylation as a second wave of PARP1 signaling.模块化抗体揭示了 DNA 损伤诱导的单 ADP-核糖基化作为 PARP1 信号的第二波。
Mol Cell. 2023 May 18;83(10):1743-1760.e11. doi: 10.1016/j.molcel.2023.03.027. Epub 2023 Apr 27.

本文引用的文献

1
Serine ADP-ribosylation marks nucleosomes for ALC1-dependent chromatin remodeling.丝氨酸 ADP-ribosylation 标记核小体,以依赖于 ALC1 的染色质重塑。
Elife. 2021 Dec 7;10:e71502. doi: 10.7554/eLife.71502.
2
HPF1 dynamically controls the PARP1/2 balance between initiating and elongating ADP-ribose modifications.HPF1 动态控制 PARP1/2 之间起始和延伸 ADP-ribose 修饰的平衡。
Nat Commun. 2021 Nov 18;12(1):6675. doi: 10.1038/s41467-021-27043-8.
3
The regulatory landscape of the human HPF1- and ARH3-dependent ADP-ribosylome.人类 HPF1 和 ARH3 依赖的 ADP-ribosylome 的调控景观。
Nat Commun. 2021 Oct 8;12(1):5893. doi: 10.1038/s41467-021-26172-4.
4
Synthesis of ADP-Ribosylated Histones Reveals Site-Specific Impacts on Chromatin Structure and Function.ADP-核糖基化组蛋白的合成揭示了对染色质结构和功能的位点特异性影响。
J Am Chem Soc. 2021 Jul 28;143(29):10847-10852. doi: 10.1021/jacs.1c05429. Epub 2021 Jul 15.
5
Unrestrained poly-ADP-ribosylation provides insights into chromatin regulation and human disease.无约束的多聚 ADP-核糖基化提供了对染色质调控和人类疾病的深入了解。
Mol Cell. 2021 Jun 17;81(12):2640-2655.e8. doi: 10.1016/j.molcel.2021.04.028. Epub 2021 May 20.
6
HPF1 and nucleosomes mediate a dramatic switch in activity of PARP1 from polymerase to hydrolase.HPF1 和核小体介导 PARP1 从聚合酶到水解酶活性的剧烈转变。
Elife. 2021 Mar 8;10:e65773. doi: 10.7554/eLife.65773.
7
An HPF1/PARP1-Based Chemical Biology Strategy for Exploring ADP-Ribosylation.基于 HPF1/PARP1 的化学生物学策略探索 ADP-核糖基化。
Cell. 2020 Nov 12;183(4):1086-1102.e23. doi: 10.1016/j.cell.2020.09.055.
8
Poly(ADP-ribose) polymerase inhibition: past, present and future.聚(ADP-核糖)聚合酶抑制:过去、现在和未来。
Nat Rev Drug Discov. 2020 Oct;19(10):711-736. doi: 10.1038/s41573-020-0076-6. Epub 2020 Sep 3.
9
HPF1 completes the PARP active site for DNA damage-induced ADP-ribosylation.HPF1 完成了 PARP 活性部位,以促进 DNA 损伤诱导的 ADP-核糖基化。
Nature. 2020 Mar;579(7800):598-602. doi: 10.1038/s41586-020-2013-6. Epub 2020 Feb 6.
10
Systems-wide Analysis of Serine ADP-Ribosylation Reveals Widespread Occurrence and Site-Specific Overlap with Phosphorylation.系统范围的丝氨酸 ADP-核糖基化分析揭示了广泛的发生和与磷酸化的特异性重叠。
Cell Rep. 2018 Aug 28;24(9):2493-2505.e4. doi: 10.1016/j.celrep.2018.07.083.