Cho Byoung Chul, Loong Herbert H F, Tsai Chun-Ming, Teo Man Lung P, Kim Hye Ryun, Lim Sun Min, Jain Suyog, Olsen Steve, Park Keunchil
Division of Medical Oncology, Yonsei Cancer Center, Seoul 03722, Korea.
Department of Clinical Oncology, The Chinese University of Hong Kong, Hong Kong SAR, China.
Curr Oncol. 2022 Mar 21;29(3):2154-2164. doi: 10.3390/curroncol29030174.
Plasma-based next-generation sequencing (NGS) has demonstrated the potential to guide the personalized treatment of non-small cell lung cancer (NSCLC). Inherent differences in mutational genomic profiles of NSCLC exist between Asian and Western populations. However, the published mutational genomic data of NSCLC has largely focused on Western populations. We retrospectively analyzed results from comprehensive NGS of plasma (Guardant360) from patients with advanced non-squamous NSCLC, as seen in clinical practice. Tests were ordered between January 2016 and December 2020 in Hong Kong, Korea, Taiwan, Japan and Southeast Asia. The assay identified single-nucleotide variants (SNV), insertions and deletions, and fusions and amplifications in 74 genes. In total, 1608 plasma samples from patients with advanced non-squamous NSCLC were tested. The median turnaround time for test results was 7 days. Of the samples with detectable ctDNA (85.6%), 68.3% had alterations in at least one NCCN-recommended NSCLC biomarker. EGFR driver mutations were most frequent (48.6%), followed by alterations of KRAS (7.9%), ERBB2 (4.1%) and ALK (2.5%). Co-mutations of EGFR and KRAS occurred in 4.7% of samples. KRAS G12C was identified in 18.6% of all samples with KRAS mutations. Common mutations, such as exon 19 deletions and L858R, accounted for 88.4% of EGFR driver mutations. Among the samples with any EGFR driver mutation, T790M was present in 36.9%, including 7.7% with additional alterations associated with osimertinib resistance (MET amplification, C797X). Comprehensive plasma-based NGS provided the timely and clinically informative mutational genomic profiling of advanced non-squamous NSCLC in East Asian patients.
基于血浆的下一代测序(NGS)已显示出指导非小细胞肺癌(NSCLC)个性化治疗的潜力。亚洲和西方人群的NSCLC突变基因组图谱存在内在差异。然而,已发表的NSCLC突变基因组数据主要集中在西方人群。我们回顾性分析了晚期非鳞状NSCLC患者血浆综合NGS(Guardant360)的结果,这是临床实践中的常见情况。检测于2016年1月至2020年12月在香港、韩国、台湾、日本和东南亚进行。该检测鉴定了74个基因中的单核苷酸变异(SNV)、插入和缺失以及融合和扩增。总共检测了1608例晚期非鳞状NSCLC患者的血浆样本。检测结果的中位周转时间为7天。在可检测到ctDNA的样本中(85.6%),68.3%在至少一种NCCN推荐的NSCLC生物标志物中存在改变。EGFR驱动突变最为常见(48.6%),其次是KRAS(7.9%)、ERBB2(4.1%)和ALK(2.5%)改变。EGFR和KRAS共突变出现在4.7%的样本中。在所有KRAS突变样本中,18.6%鉴定出KRAS G12C。常见突变,如外显子19缺失和L858R,占EGFR驱动突变的88.4%。在任何EGFR驱动突变的样本中,T790M出现在36.9%,包括7.7%伴有与奥希替尼耐药相关的其他改变(MET扩增、C797X)。基于血浆的综合NGS为东亚晚期非鳞状NSCLC患者提供了及时且具有临床参考价值的突变基因组图谱。