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构建用于标记肿瘤细胞和致癌蛋白的新型慢病毒载体。

Engineering Novel Lentiviral Vectors for Labelling Tumour Cells and Oncogenic Proteins.

作者信息

Akgül Seçkin, Offenhäuser Carolin, Kordowski Anja, Day Bryan W

机构信息

Sid Faithfull Brain Cancer Laboratory, Cell and Molecular Biology Department, QIMR Berghofer Medical Research Institute, Brisbane, QLD 4006, Australia.

School of Medicine and Dentistry, Griffith University, Gold Coast, QLD 4215, Australia.

出版信息

Bioengineering (Basel). 2022 Feb 25;9(3):91. doi: 10.3390/bioengineering9030091.

DOI:10.3390/bioengineering9030091
PMID:35324780
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8945451/
Abstract

Lentiviral vectors are unique and highly efficient genetic tools to incorporate genetic materials into the genome of a variety of cells whilst conserving biosafety. Their rapid acceptance made it necessary to improve existing protocols, including molecular engineering and cloning, production of purified lentiviral particles, and efficient infection of target cells. In addition to traditional protocols, which can be time-consuming, several biotechnology companies are providing scientists with commercially available lentiviral constructs and particles. However, these constructs are limited by their original form, tend to be costly, and lack the flexibility to re-engineer based on the ever-changing needs of scientific projects. Therefore, the current study organizes the existing methods and integrates them with novel ideas to establish a protocol that is simple and efficient to implement. In this study we, (i) generated an innovative site-directed nucleotide attachment/replacement and DNA insertion method using unique PCR primers, (ii) improved traditional methods by integrating plasmid clarification steps, (iii) utilized endogenous mRNA as a resource to construct new lentiviruses, and (iv) identified an existing purification method and incorporated it into an organized workflow to produce high-yield lentiviral particle collection. Finally, (v) we verified and demonstrated the functional validity of our methods using an infection strategy.

摘要

慢病毒载体是一种独特且高效的基因工具,可在确保生物安全性的同时将遗传物质整合到多种细胞的基因组中。它们迅速被广泛接受,这使得改进现有方案变得必要,这些方案包括分子工程和克隆、纯化慢病毒颗粒的生产以及对靶细胞的有效感染。除了可能耗时的传统方案外,几家生物技术公司正在为科学家提供商业上可获得的慢病毒构建体和颗粒。然而,这些构建体受到其原始形式的限制,往往成本高昂,并且缺乏根据科学项目不断变化的需求进行重新设计的灵活性。因此,当前的研究整理了现有方法,并将它们与新想法相结合,以建立一种易于实施的简单高效方案。在本研究中,我们:(i) 使用独特的PCR引物生成了一种创新的定点核苷酸连接/替换和DNA插入方法;(ii) 通过整合质粒澄清步骤改进了传统方法;(iii) 利用内源性mRNA作为资源构建新的慢病毒;(iv) 确定了一种现有的纯化方法,并将其纳入一个有组织的工作流程中,以产生高产的慢病毒颗粒收集物。最后,(v) 我们使用感染策略验证并证明了我们方法的功能有效性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/85ff/8945451/6b1379766c9e/bioengineering-09-00091-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/85ff/8945451/cab173f6135b/bioengineering-09-00091-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/85ff/8945451/7073b360150f/bioengineering-09-00091-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/85ff/8945451/579bc22cfcfd/bioengineering-09-00091-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/85ff/8945451/fdf255885904/bioengineering-09-00091-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/85ff/8945451/6b1379766c9e/bioengineering-09-00091-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/85ff/8945451/cab173f6135b/bioengineering-09-00091-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/85ff/8945451/7073b360150f/bioengineering-09-00091-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/85ff/8945451/579bc22cfcfd/bioengineering-09-00091-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/85ff/8945451/fdf255885904/bioengineering-09-00091-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/85ff/8945451/6b1379766c9e/bioengineering-09-00091-g005.jpg

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本文引用的文献

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Q-Cell Glioblastoma Resource: Proteomics Analysis Reveals Unique Cell-States are Maintained in 3D Culture.Q-Cell 胶质母细胞瘤资源:蛋白质组学分析显示 3D 培养中维持着独特的细胞状态。
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A reference collection of patient-derived cell line and xenograft models of proneural, classical and mesenchymal glioblastoma.成神经管细胞瘤、经典型和间充质神经胶质瘤患者来源细胞系和异种移植模型参考集。
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Intratumoural Heterogeneity Underlies Distinct Therapy Responses and Treatment Resistance in Glioblastoma.
肿瘤内异质性是胶质母细胞瘤不同治疗反应和治疗抵抗的基础。
Cancers (Basel). 2019 Feb 6;11(2):190. doi: 10.3390/cancers11020190.
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Integrated Method for Purification and Single-Particle Characterization of Lentiviral Vector Systems by Size Exclusion Chromatography and Tunable Resistive Pulse Sensing.通过尺寸排阻色谱法和可调电阻脉冲传感对慢病毒载体系统进行纯化和单颗粒表征的综合方法
Mol Biotechnol. 2017 Jul;59(7):251-259. doi: 10.1007/s12033-017-0009-8.
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Challenges of up-scaling lentivirus production and processing.扩大慢病毒生产与处理规模的挑战。
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Construction of Conveniently Screening pLKO.1-TRC Vector Tagged with TurboGFP.构建带有TurboGFP标签的便捷筛选pLKO.1-TRC载体
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Glioma surgical aspirate: a viable source of tumor tissue for experimental research.神经胶质瘤手术吸引物:实验研究中肿瘤组织的可行来源。
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Lentiviral overexpression of miRNAs.慢病毒介导的miRNA过表达
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EphA3 maintains tumorigenicity and is a therapeutic target in glioblastoma multiforme.EphA3 维持肿瘤发生能力,是多形性胶质母细胞瘤的治疗靶点。
Cancer Cell. 2013 Feb 11;23(2):238-48. doi: 10.1016/j.ccr.2013.01.007.