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中国搁浅瓜头鲸的肠道微生物特征

Gut Microbial Characterization of Melon-Headed Whales () Stranded in China.

作者信息

Bai Shijie, Zhang Peijun, Zhang Xianfeng, Yang Zixin, Li Songhai

机构信息

Institute of Deep-Sea Science and Engineering, Chinese Academy of Sciences, Sanya 572000, China.

Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China.

出版信息

Microorganisms. 2022 Mar 6;10(3):572. doi: 10.3390/microorganisms10030572.

Abstract

Although gut microbes are regarded as a significant component of many mammals and play a very important role, there is a paucity of knowledge around marine mammal gut microbes, which may be due to sampling difficulties. Moreover, to date, there are very few, if any, reports on the gut microbes of melon-headed whales. In this study, we opportunistically collected fecal samples from eight stranded melon-headed whales () in China. Using high-throughput sequencing technology of partial 16S rRNA gene sequences, we demonstrate that the main taxa of melon-headed whale gut microbes are Firmicutes, Fusobacteriota, Bacteroidota, and Proteobacteria (Gamma) at the phylum taxonomic level, and , , , and at the genus taxonomic level. Meanwhile, molecular ecological network analysis (MENA) shows that two modules (a set of nodes that have strong interactions) constitute the gut microbial community network of melon-headed whales. Module 1 is mainly composed of , while Module 2 comprises and , and the network keystone genera are , , , and . Furthermore, by predicting the functions of the gut microbial community through PICRUSt2, we found that although there are differences in the composition of the gut microbial community in different individuals, the predicted functional profiles are similar. Our study gives a preliminary inside look into the composition of the gut microbiota of stranded melon-headed whales.

摘要

尽管肠道微生物被视为许多哺乳动物的重要组成部分并发挥着非常重要的作用,但关于海洋哺乳动物肠道微生物的知识却很匮乏,这可能是由于采样困难所致。此外,迄今为止,关于瓜头鲸肠道微生物的报道极少,即便有也寥寥无几。在本研究中,我们在中国从八头搁浅的瓜头鲸()身上 opportunistically 收集了粪便样本。利用部分 16S rRNA 基因序列的高通量测序技术,我们证明在门分类水平上,瓜头鲸肠道微生物的主要分类群为厚壁菌门、梭杆菌门、拟杆菌门和变形菌门(γ 变形菌纲),在属分类水平上为 、 、 和 。同时,分子生态网络分析(MENA)表明,两个模块(一组具有强相互作用的节点)构成了瓜头鲸的肠道微生物群落网络。模块 1 主要由 组成,而模块 2 由 和 组成,网络关键属为 、 、 和 。此外,通过 PICRUSt2 预测肠道微生物群落的功能,我们发现尽管不同个体的肠道微生物群落组成存在差异,但预测的功能概况相似。我们的研究初步深入了解了搁浅瓜头鲸肠道微生物群的组成。

原文中“opportunistically”这个词在中文语境中不太好准确对应一个简洁的词汇,这里保留了英文,可能需要结合上下文进一步理解其确切含义以便更精准翻译。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/133d/8950688/7c7c5f49b03f/microorganisms-10-00572-g001.jpg

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