Carvalho Luísa C, Ramos Miguel J N, Faísca-Silva David, van der Kellen David, Fernandes João C, Egipto Ricardo, Lopes Carlos M, Amâncio Sara
Linking Landscape, Environment, Agriculture and Food Research Centre (LEAF), Associated Laboratory TERRA, Instituto Superior de Agronomia, Universidade de Lisboa, 1649-004 Lisboa, Portugal.
Plants (Basel). 2022 Mar 21;11(6):827. doi: 10.3390/plants11060827.
Grapevine ( L.) is one of the most economically important crops worldwide, especially due to the economic relevance of wine production. Abiotic stress, such as drought, may contribute to low yield, shifts in quality, and important economic loss. The predicted climate change phenomena point to warmer and dryer Mediterranean environmental conditions; as such, it is paramount to study the effects of abiotic stress on grapevine performance. Deficit irrigation systems are applied to optimize water use efficiency without compromising berry quality. In this research, the effect of two deficit irrigation strategies, sustained deficit irrigation (SDI) and regulated deficit irrigation (RDI), in the grape berry were assessed. The effects of different levels of drought were monitored in Touriga Nacional at key stages of berry development (pea size, , and full maturation) through RNA-Seq transcriptome analysis and by specific differentially expressed genes (DEGs) monitoring through RT-qPCR. Handy datasets were obtained by bioinformatics analysis of raw RNA-Seq results. The dominant proportion of transcripts was mostly regulated by development, with showing more upregulated transcripts. Results showed that primary metabolism is the functional category more severely affected under water stress. Almost all DEGs selected for RT-qPCR were significantly upregulated in full maturation and showed the highest variability at and the lowest gene expression values in the pea size stage.
葡萄(Vitis vinifera L.)是全球经济上最重要的作物之一,尤其是因为葡萄酒生产具有重要的经济意义。干旱等非生物胁迫可能导致产量降低、品质变化以及重大的经济损失。预测的气候变化现象表明地中海环境将变得更温暖、更干燥;因此,研究非生物胁迫对葡萄性能的影响至关重要。亏缺灌溉系统被用于优化水分利用效率,同时不影响浆果品质。在本研究中,评估了两种亏缺灌溉策略,即持续亏缺灌溉(SDI)和调控亏缺灌溉(RDI)对葡萄浆果的影响。通过RNA测序转录组分析以及通过逆转录定量聚合酶链反应(RT-qPCR)监测特定差异表达基因(DEG),在浆果发育的关键阶段(豌豆大小期、[此处原文缺失部分内容]和完全成熟)对图丽佳(Touriga Nacional)葡萄品种不同程度干旱的影响进行了监测。通过对原始RNA测序结果进行生物信息学分析获得了有用的数据集。转录本的主要部分大多受发育调控,[此处原文缺失部分内容]显示出更多上调的转录本。结果表明,初级代谢是在水分胁迫下受影响最严重的功能类别。几乎所有选择用于RT-qPCR的DEG在完全成熟时均显著上调,并且在[此处原文缺失部分内容]表现出最高的变异性,在豌豆大小期基因表达值最低。