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解析植物中的钙信号传导机制:通过功能基因组学挖掘潜力

Delineating Calcium Signaling Machinery in Plants: Tapping the Potential through Functional Genomics.

作者信息

Ghosh Soma, Bheri Malathi, Pandey Girdhar K

机构信息

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India.

出版信息

Curr Genomics. 2021 Dec 30;22(6):404-439. doi: 10.2174/1389202922666211130143328.

Abstract

Plants have developed calcium (Ca) signaling as an important mechanism of  regulation of  stress perception,  developmental cues, and  responsive gene  expression. The  post-genomic era has witnessed the successful unravelling of the functional characterization of genes and the creation of large datasets of molecular information. The major elements of Ca signaling machinery include Ca sensors and responders such as Calmodulins (CaMs), Calmodulin-like proteins (CMLs), Ca/CaM-dependent protein kinases (CCaMKs), Ca-dependent protein kinases (CDPKs), Calcineurin B-like proteins (CBLs) as well as transporters, such as Cyclic nucleotide-gated channels (CNGCs), Glutamate-like receptors (GLRs), Ca-ATPases, Ca/H exchangers (CAXs) and mechanosensitive channels. These elements play an important role in the regulation of physiological processes and plant responses to various stresses. Detailed genomic analysis can help us in the identification of potential molecular targets that can be exploited towards the development of stress-tolerant crops. The information sourced from model systems through omics approaches helps in the prediction and simulation of regulatory networks involved in responses to different stimuli at the molecular and cellular levels. The molecular delineation of Ca signaling pathways could be a stepping stone for engineering climate-resilient crop plants. Here, we review the recent developments in Ca signaling in the context of transport, responses, and adaptations significant for crop improvement through functional genomics approaches.

摘要

植物已发展出钙(Ca)信号传导,作为调节胁迫感知、发育线索和响应基因表达的重要机制。后基因组时代见证了基因功能特征的成功解析以及大量分子信息数据集的创建。钙信号传导机制的主要元件包括钙传感器和响应器,如钙调蛋白(CaMs)、类钙调蛋白(CMLs)、钙/钙调蛋白依赖性蛋白激酶(CCaMKs)、钙依赖性蛋白激酶(CDPKs)、类钙调神经磷酸酶B蛋白(CBLs),以及转运蛋白,如环核苷酸门控通道(CNGCs)、类谷氨酸受体(GLRs)、钙ATP酶、钙/氢交换体(CAXs)和机械敏感通道。这些元件在调节生理过程和植物对各种胁迫的响应中发挥重要作用。详细的基因组分析有助于我们识别潜在的分子靶点,用于培育抗逆作物。通过组学方法从模式系统获取的信息有助于预测和模拟分子和细胞水平上参与对不同刺激响应的调控网络。钙信号通路的分子解析可能是培育适应气候变化作物的垫脚石。在此,我们综述了通过功能基因组学方法,在对作物改良具有重要意义的运输、响应和适应方面,钙信号传导的最新进展。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2edf/8886624/a8bb86d7eeeb/CG-22-404_F1.jpg

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