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sp. nov.,一种从旧干草中分离出的一氧化碳氧化乙酸菌。

sp. nov., a carbon monoxide-oxidizing acetogen isolated from old hay.

机构信息

Department of Microbiology and Plant Biology, University of Oklahoma, Norman OK 73019, USA.

出版信息

Int J Syst Evol Microbiol. 2022 Mar;72(3). doi: 10.1099/ijsem.0.005297.

Abstract

An acid/alcohol-producing, Gram-stain-positive, obligately anaerobic, rod-shaped, non-motile, non-spore forming acetogen, designated as strain P21, was isolated from old hay after enrichment with CO as the substrate. Spores not observed even after prolonged incubation (30 days). Phylogenetic analysis of the 16S rRNA gene sequence of strain P21 showed it was closely related to DSM 15243 (97.9%), DSM 757 (97.7 %) and DSM 12750 (97.7 %). The genome is 5.6 Mb and the G+C content is 29.4 mol%. Average nucleotide identity between strain P21, , and was 87.1, 86.4, 86.4 %, respectively. Strain P21 grew on CO:CO, H:CO, l-arabinose, ribose, xylose, fructose, galactose, glucose, lactose, mannose, cellobiose, sucrose, cellulose, starch, pyruvate, choline, glutamate, histidine, serine, threonine and casamino acids. End products of metabolism were acetate, butyrate, caproate, ethanol and hexanol. Dominant cellular fatty acids (>10 %) were C (41.5 %), C ω7/C ω6 (10.0 %), and a summed feature containing cyclo C/C (17.3 %). Based on the phenotypic, chemotaxonomic, phylogenetic and phylogenomic analyses, strain P21 represents a new species in the genus , for which the name sp. nov. is proposed. The type strain is P21 (=DSM 111390=NCIMB 15261).

摘要

一株产酸/产酒精、革兰氏阳性、严格厌氧、杆状、非运动、不产芽孢的乙酰生成菌,编号为 P21 株,从富含 CO 的旧干草中经富集分离得到。即使延长孵育时间(30 天)也未观察到孢子。P21 株的 16S rRNA 基因序列的系统发育分析表明,它与 DSM 15243(97.9%)、DSM 757(97.7%)和 DSM 12750(97.7%)密切相关。基因组大小为 5.6Mb,GC 含量为 29.4mol%。P21 株与 DSM 15243、DSM 757 和 DSM 12750 的平均核苷酸同一性分别为 87.1%、86.4%和 86.4%。P21 株能够以 CO:CO、H:CO、L-阿拉伯糖、核糖、木糖、果糖、半乳糖、葡萄糖、乳糖、甘露糖、纤维二糖、蔗糖、纤维素、淀粉、丙酮酸、胆碱、谷氨酸、组氨酸、丝氨酸、苏氨酸和氨基酸为碳源生长。代谢的终产物为乙酸盐、丁酸盐、己酸盐、乙醇和正己醇。主要的细胞脂肪酸(>10%)为 C(41.5%)、Cω7/Cω6(10.0%)和一个包含环 C/C 的特征性脂肪酸(17.3%)。基于表型、化学分类、系统发育和系统基因组学分析,P21 株代表了该属中的一个新种,建议将其命名为 sp. nov.。模式菌株为 P21(=DSM 111390=NCIMB 15261)。

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