Park Soyeon, Jang Jeonghwan
Division of Biotechnology and Advanced Institute of Environment and Bioscience, Jeonbuk National University, Iksan 54596, Jeonbuk, Republic of Korea.
Microorganisms. 2024 Dec 19;12(12):2634. doi: 10.3390/microorganisms12122634.
A Gram-positive, rod-shaped, and obligate anaerobic bacterial strain OS1-26 was isolated from apple orchard soil in Iksan, South Korea. Interestingly, strain OS1-26 was observed to possess the functional genes involved in biological nitrogen fixation (BNF), including , which was actively transcribed during the anaerobic cultivation with excessive production of extracellular NH despite of presence of other fixed N nutrients. The BNF of strain OS1-26 was distinguished from the other well-known diazotrophs, such as and . The altruistic N-fixing ability of the strain may play a pivotal role in providing N nutrients to the microbial community and plants in the soil ecosystem. The microorganism grew at 25-35 °C (optimum 30-35 °C) and pH 5.0-8.0 (optimum 6.0-8.0) but was not able to grow in the presence of >0.5% NaCl. The major cellular fatty acids of strain OS1-26 were C, C, and the summed feature consisted of C ω7c and C ω6c (35.63%, 25.29%, and 18.84%, respectively). The 16S rRNA phylogeny indicated that strain OS1-26 is a member of the genus , and the closest species are , and with 16S rRNA sequence similarities such as 99.71%, 98.52%, and 98.45%, respectively. In spite of the high 16S rRNA sequence similarity, strain OS1-26 showed overall genomic relatedness, such as the average nucleotide identity (ANI), and phenotypical features distinctly different from . Although the species taxonomy of strain OS1-26 is undetermined within the genus based on overall genomic and phenotypic properties, further studies on the soil bacterial strain would enhance our understanding of its taxonomic identity, ecological roles for the terrestrial soil N cycle, and the potential to be developed as a biological N fertilizer.
从韩国益山市的苹果园土壤中分离出一株革兰氏阳性、杆状的专性厌氧细菌菌株OS1-26。有趣的是,观察到菌株OS1-26拥有参与生物固氮(BNF)的功能基因,包括 ,尽管存在其他固定态氮养分,但在厌氧培养过程中该基因仍被积极转录,并大量产生细胞外NH。菌株OS1-26的生物固氮与其他著名的固氮菌,如 和 不同。该菌株的利他性固氮能力可能在为土壤生态系统中的微生物群落和植物提供氮养分方面发挥关键作用。该微生物在25-35°C(最适温度30-35°C)和pH 5.0-8.0(最适pH 6.0-8.0)下生长,但在NaCl浓度>0.5%时无法生长。菌株OS1-26的主要细胞脂肪酸为C、C,总和特征由C ω7c和C ω6c组成(分别为35.63%、25.29%和18.84%)。16S rRNA系统发育分析表明,菌株OS1-26是 属的成员,与其亲缘关系最近的物种分别是 、 和 ,16S rRNA序列相似性分别为99.71%、98.52%和98.45%。尽管16S rRNA序列相似性较高,但菌株OS1-26在整体基因组相关性方面,如平均核苷酸同一性(ANI),以及表型特征与 明显不同。尽管基于整体基因组和表型特性,菌株OS1-26在 属内的物种分类尚未确定,但对该土壤细菌菌株的进一步研究将增进我们对其分类身份、在陆地土壤氮循环中的生态作用以及作为生物氮肥开发潜力的理解。