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CRISPR-Cas13介导的活细胞RNA成像及RNA-蛋白质相互作用检测的进展

Progress of CRISPR-Cas13 Mediated Live-Cell RNA Imaging and Detection of RNA-Protein Interactions.

作者信息

Cao Huake, Wang Yuechen, Zhang Ning, Xia Siyuan, Tian Pengfei, Lu Li, Du Juan, Du Yinan

机构信息

School of Basic Medical Sciences, Anhui Medical University, Hefei, China.

First School of Clinical Medicine, Anhui Medical University, Hefei, China.

出版信息

Front Cell Dev Biol. 2022 Mar 9;10:866820. doi: 10.3389/fcell.2022.866820. eCollection 2022.

Abstract

Ribonucleic acid (RNA) and proteins play critical roles in gene expression and regulation. The relevant study increases the understanding of various life processes and contributes to the diagnosis and treatment of different diseases. RNA imaging and mapping RNA-protein interactions expand the understanding of RNA biology. However, the existing methods have some limitations. Recently, precise RNA targeting of CRISPR-Cas13 in cells has been reported, which is considered a new promising platform for RNA imaging in living cells and recognition of RNA-protein interactions. In this review, we first described the current findings on Cas13. Furthermore, we introduced current tools of RNA real-time imaging and mapping RNA-protein interactions and highlighted the latest advances in Cas13-mediated tools. Finally, we discussed the advantages and disadvantages of Cas13-based methods, providing a set of new ideas for the optimization of Cas13-mediated methods.

摘要

核糖核酸(RNA)和蛋白质在基因表达与调控中发挥着关键作用。相关研究增进了对各种生命过程的理解,并有助于不同疾病的诊断与治疗。RNA成像以及绘制RNA-蛋白质相互作用图谱拓展了对RNA生物学的认识。然而,现有方法存在一些局限性。最近,有报道称CRISPR-Cas13在细胞中能够实现精确的RNA靶向,这被认为是一种用于活细胞RNA成像和识别RNA-蛋白质相互作用的新的有前景的平台。在这篇综述中,我们首先描述了关于Cas13的当前研究结果。此外,我们介绍了当前RNA实时成像和绘制RNA-蛋白质相互作用的工具,并强调了Cas13介导工具的最新进展。最后,我们讨论了基于Cas13的方法的优缺点,为优化Cas13介导的方法提供了一系列新思路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e685/8959342/a33fe3e70005/fcell-10-866820-g001.jpg

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