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一种广泛分布的杂草——(禾本科)的完整叶绿体基因组特征分析

Characterization of the complete chloroplast genome of (Poaceae), a widespread weed.

作者信息

Xie Shao-Qiu, Zhong Bei, Tong Bo-Qiang, Fan Shou-Jin

机构信息

Key Lab of Plant Stress Research, College of Life Sciences, Shandong Normal University, Ji'nan, China.

Shandong Museum, Ji'nan, China.

出版信息

Mitochondrial DNA B Resour. 2022 Mar 25;7(3):537-538. doi: 10.1080/23802359.2022.2054377. eCollection 2022.

Abstract

belongs to Poaceae. The complete chloroplast genome of was reported in this study. The chloroplast genome was 137,837 bp in size with a canonical quadripartite structure, including two inverted repeat regions (IR) of 21,635 bp for each, a large single-copy (LSC) region of 81,787 bp in length, and a small single-copy (SSC) region of 12,780 bp in length. The overall guanine-cytosine (GC) content of this chloroplast genome was 38.8%, and the corresponding values of the LSC, SSC, and IR regions were 36.9%, 33.1%, and 44.1%, respectively. A total of 113 unique genes were annotated in this chloroplast genome, including four rRNA genes, 31 tRNA genes, and 78 protein-coding genes. The phylogenetic analysis showed that was clustered with .

摘要

属于禾本科。本研究报道了其完整的叶绿体基因组。叶绿体基因组大小为137,837 bp,具有典型的四分体结构,包括两个21,635 bp的反向重复区域(IR)、一个81,787 bp的大单拷贝(LSC)区域和一个12,780 bp的小单拷贝(SSC)区域。该叶绿体基因组的鸟嘌呤-胞嘧啶(GC)总含量为38.8%,LSC、SSC和IR区域的相应值分别为36.9%、33.1%和44.1%。该叶绿体基因组共注释了113个独特基因,包括4个rRNA基因、31个tRNA基因和78个蛋白质编码基因。系统发育分析表明,与 聚类在一起。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bc86/8959506/bf88a76cd963/TMDN_A_2054377_F0001_B.jpg

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