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麦克卢尔草(禾本科)的完整叶绿体基因组。

The complete chloroplast genome of McClure (Poaceae).

作者信息

Yu Zheng, Linying Zhao, Tao Wang, Guofu Chen, Yifeng Hong, Jinjun Yue

机构信息

East China Inventory and Planning Institute of National Forestry and Grassland Administration, Hangzhou, China.

Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Hangzhou, China.

出版信息

Mitochondrial DNA B Resour. 2021 Jan 16;6(1):187-188. doi: 10.1080/23802359.2020.1860703.

DOI:10.1080/23802359.2020.1860703
PMID:33537438
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7832504/
Abstract

McClure is a precious wood-use bamboo resource, with almost straight stem. The complete chloroplast genome of the McClure was assembled for the first time from Illumina pair-end sequencing data in this work. The total genome size of McClure was 139,678 bp in length, containing a large single-copy (LSC) region of 83,212 bp, a small single-copy (SSC) region of 12,870 bp, and a pair of inverted repeat (IR) regions of 21,798 bp. The overall GC content of the genome was 38.89%, and the corresponding values of the LSC, SSC, and IR regions were 36.97, 33.17, and 44.22%, respectively. A total of 131 genes were annotated, including 85 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. Phylogenetic analysis results strongly supported that McClure was closely related to .

摘要

篾竹是一种珍贵的用材竹资源,茎几乎是直的。在本研究中,首次从Illumina双端测序数据组装出篾竹的完整叶绿体基因组。篾竹的基因组全长139,678 bp,包含一个83,212 bp的大单拷贝(LSC)区域、一个12,870 bp的小单拷贝(SSC)区域和一对21,798 bp的反向重复(IR)区域。基因组的总体GC含量为38.89%,LSC、SSC和IR区域的相应值分别为36.97%、33.17%和44.22%。共注释了131个基因,包括85个蛋白质编码基因、36个tRNA基因和8个rRNA基因。系统发育分析结果有力地支持篾竹与……密切相关。

需注意,原文中“Phylogenetic analysis results strongly supported that McClure was closely related to.”后面缺少具体内容。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/58fb/7832504/f3514a010099/TMDN_A_1860703_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/58fb/7832504/f3514a010099/TMDN_A_1860703_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/58fb/7832504/f3514a010099/TMDN_A_1860703_F0001_C.jpg

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Genome Biol. 2020 Sep 10;21(1):241. doi: 10.1186/s13059-020-02154-5.
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Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(2):983-5. doi: 10.3109/19401736.2014.926516. Epub 2014 Jun 18.
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OrganellarGenomeDRAW--a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets.细胞器基因组绘图软件--一套用于生成质体和线粒体基因组物理图谱以及可视化表达数据集的工具。
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5
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6
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7
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8
The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs.用于检测tRNA和snoRNA的tRNAscan-SE、snoscan和snoGPS网络服务器。
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