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ASF1B是一种有前景的预后生物标志物,与肝细胞癌的免疫治疗疗效相关。

ASF1B is a Promising Prognostic Biomarker and Correlates With Immunotherapy Efficacy in Hepatocellular Carcinoma.

作者信息

Zhang Shirong, Xu Longwen, Feng Jinteng, Tan Deli, Zhu Yue, Hou Jia, Li Wenyuan, Lv Kejia, Wang Wenjuan, Jiang Lili, Jiao Min, Guo Hui

机构信息

Department of Medical Oncology, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.

Key Laboratory of Environment and Genes Related to Diseases, Ministry of Education of China, Xi'an Jiaotong University, Xi'an, China.

出版信息

Front Genet. 2022 Mar 10;13:842351. doi: 10.3389/fgene.2022.842351. eCollection 2022.

Abstract

Anti-silencing function 1B (ASF1B), a histone H3-H4 chaperone, is crucial for S-phase progression and cell proliferation. Recent studies have shown that ASF1B may be used as a new proliferation marker for cancer prognosis. However, the prognostic value and effect of ASF1B on tumor cells and the immune microenvironment in hepatocellular carcinoma (HCC) remain unclear. We analyzed the expression of ASF1B and its prognostic value using The Cancer Genome Atlas (TCGA) database (as a training set) and other databases, and we validated the findings by immunohistochemistry in our clinical database, containing 141 HCC patients (as a validation set). Gene set enrichment analysis (GSEA) and gene set variation analysis (GSVA) were performed to probe the tumor-associated biological processes of ASF1B in HCC. The interrelationships between ASF1B expression and tumor immunological characteristics were analyzed by multiple databases. The Imvigor210 cohort was retrieved to assess the ability of ASF1B to predict immunotherapy efficacy. ASF1B was highly expressed in tumor tissue compared to paracancerous tissue. High ASF1B expression was associated with worse overall survival (OS) and progression-free survival (PFS) in the training set ( = 0.005, < 0.001) and validation set ( < 0.001, < 0.001). Multivariate analysis revealed that ASF1B was an independent prognostic factor associated with OS and PFS. GSEA and GSVA suggested that ASF1B was involved in tumor-associated biological processes, including the cell cycle, DNA replication, base excision repair, mismatch repair, RNA degradation, ubiquitin-mediated proteolysis, and nucleotide excision repair. Further analysis revealed that the levels of ASF1B were positively correlated with the immune cells infiltration of B cells, CD8 T cells, CD4 T cells, neutrophils, and dendritic cells. However, ASF1B was positively correlated with Treg cell infiltration and inhibitory immune checkpoints in exhausted T cells. Patients who received anti-PD-L1 immunotherapy with high ASF1B expression had a higher objective response. The ASF1B level is an independent prognostic factor and may serve as a potential immunotherapeutic target.

摘要

抗沉默功能蛋白1B(ASF1B)是一种组蛋白H3-H4伴侣蛋白,对S期进程和细胞增殖至关重要。最近的研究表明,ASF1B可能作为癌症预后的一种新的增殖标志物。然而,ASF1B在肝细胞癌(HCC)中对肿瘤细胞和免疫微环境的预后价值及影响仍不清楚。我们使用癌症基因组图谱(TCGA)数据库(作为训练集)和其他数据库分析了ASF1B的表达及其预后价值,并通过免疫组织化学在我们包含141例HCC患者的临床数据库(作为验证集)中验证了这些发现。进行基因集富集分析(GSEA)和基因集变异分析(GSVA)以探究ASF1B在HCC中的肿瘤相关生物学过程。通过多个数据库分析了ASF1B表达与肿瘤免疫特征之间的相互关系。检索Imvigor210队列以评估ASF1B预测免疫治疗疗效的能力。与癌旁组织相比,ASF1B在肿瘤组织中高表达。在训练集(=0.005,<0.001)和验证集(<0.001,<0.001)中,ASF1B高表达与较差的总生存期(OS)和无进展生存期(PFS)相关。多变量分析显示,ASF1B是与OS和PFS相关的独立预后因素。GSEA和GSVA表明,ASF1B参与肿瘤相关生物学过程,包括细胞周期、DNA复制、碱基切除修复、错配修复、RNA降解、泛素介导的蛋白水解和核苷酸切除修复。进一步分析显示,ASF1B水平与B细胞、CD8 T细胞、CD4 T细胞、中性粒细胞和树突状细胞的免疫细胞浸润呈正相关。然而,ASF1B与Treg细胞浸润以及耗竭T细胞中的抑制性免疫检查点呈正相关。接受抗PD-L1免疫治疗且ASF1B表达高的患者有更高的客观缓解率。ASF1B水平是一个独立的预后因素,可能作为潜在的免疫治疗靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4204/8960381/cd7614cf731e/fgene-13-842351-g001.jpg

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