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通过比较转录组学和代谢组学分析桑椹低聚半乳糖培养基中的GG

Analysis of GG in Mulberry Galacto-Oligosaccharide Medium by Comparative Transcriptomics and Metabolomics.

作者信息

Li Erna, Zhu Qiaoling, Pang Daorui, Liu Fan, Liao Sentai, Zou Yuxiao

机构信息

Key Laboratory of Functional Foods, Ministry of Agriculture and Rural Affairs, Guangdong Key Laboratory of Agricultural Products Processing, Sericultural and Agri-Food Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, China.

出版信息

Front Nutr. 2022 Mar 18;9:853271. doi: 10.3389/fnut.2022.853271. eCollection 2022.

Abstract

GG (LGG) has strong acid resistance and can survive passing through the stomach to colonize the intestines, where it promotes the growth of beneficial bacteria. Prebiotics such as mulberry galacto-oligosaccharide (MGO), mulberry polysaccharide solution (MPS), and galactooligosaccharides (GOS) promote LGG proliferation, and MGO has the greatest effect. After culturing LGG with prebiotics, changes in gene expression were studied at the transcriptomic and metabolomic levels. The results showed that, in the stable 24-h growth period of cultivation, ~63 and 132% more differential genes were found after MPS and MGO were added to the MRS medium, respectively, than after GOS was added, and the numbers of up-regulated genes were about 18 and 66% higher with MPS and MGO, respectively, than GOS. Analysis using the KEGG database revealed that, when LGG was cultured with MGO, 120 genes that were up-regulated as the growth rate increased were mainly enriched in pathways such as membrane transport, amino acid metabolism, and carbohydrate metabolism. The genes and were up-regulated for galactose metabolism, and was up-regulated in the glycolysis/gluconeogenesis pathway. The qRT-RCR results, which were in agreement with the RNA-seq, indicated the genes involved in the proliferation effect of LGG were up-regulated. UDP-glucose may be a key metabolite for MGO to promote LGG proliferation.

摘要

嗜酸乳杆菌(LGG)具有很强的耐酸性,能够在通过胃部后存活下来并在肠道中定殖,在肠道中它能促进有益菌的生长。益生元如桑椹低聚半乳糖(MGO)、桑椹多糖溶液(MPS)和低聚半乳糖(GOS)可促进嗜酸乳杆菌的增殖,其中MGO的效果最为显著。在用益生元培养嗜酸乳杆菌后,在转录组学和代谢组学水平上研究了基因表达的变化。结果表明,在培养稳定的24小时生长阶段,与添加GOS相比,在MRS培养基中添加MPS和MGO后分别发现差异基因多出约63%和132%,并且上调基因的数量分别比GOS高出约18%和66%。使用KEGG数据库分析表明,当嗜酸乳杆菌与MGO一起培养时,随着生长速率增加而上调的120个基因主要富集在膜转运、氨基酸代谢和碳水化合物代谢等途径中。galE和galT基因在半乳糖代谢中上调,pgk基因在糖酵解/糖异生途径中上调。与RNA测序结果一致的qRT-RCR结果表明,参与嗜酸乳杆菌增殖效应的基因被上调。UDP-葡萄糖可能是MGO促进嗜酸乳杆菌增殖的关键代谢产物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/790d/8973438/60a6cd992a69/fnut-09-853271-g0001.jpg

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