• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

Ahr2 依赖性 wfikkn1 基因影响斑马鱼转录组、蛋白质组和行为。

The Ahr2-Dependent wfikkn1 Gene Influences Zebrafish Transcriptome, Proteome, and Behavior.

机构信息

Department of Environmental and Molecular Toxicology, The Sinnhuber Aquatic Research Laboratory, Oregon State University, Corvallis, Oregon 97331, USA.

Department of Microbiology and Immunology, Geisel School of Medicine at Dartmouth, Norris Cotton Cancer Center, Lebanon, New Hampshire 03756 USA.

出版信息

Toxicol Sci. 2022 May 26;187(2):325-344. doi: 10.1093/toxsci/kfac037.

DOI:10.1093/toxsci/kfac037
PMID:35377459
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9308396/
Abstract

The aryl hydrocarbon receptor (AHR) is required for vertebrate development and is also activated by exogenous chemicals, including polycyclic aromatic hydrocarbons (PAHs) and 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD). AHR activation is well-understood, but roles of downstream molecular signaling events are largely unknown. From previous transcriptomics in 48 h postfertilization (hpf) zebrafish exposed to several PAHs and TCDD, we found wfikkn1 was highly coexpressed with cyp1a (marker for AHR activation). Thus, we hypothesized wfikkn1's role in AHR signaling, and showed that wfikkn1 expression was Ahr2 (zebrafish ortholog of human AHR)-dependent in developing zebrafish exposed to TCDD. To functionally characterize wfikkn1, we made a CRISPR-Cas9 mutant line with a 16-bp deletion in wfikkn1's exon, and exposed wildtype and mutants to dimethyl sulfoxide or TCDD. 48-hpf mRNA sequencing revealed over 700 genes that were differentially expressed (p < .05, log2FC > 1) between each pair of treatment combinations, suggesting an important role for wfikkn1 in altering both the 48-hpf transcriptome and TCDD-induced expression changes. Mass spectrometry-based proteomics of 48-hpf wildtype and mutants revealed 325 significant differentially expressed proteins. Functional enrichment demonstrated wfikkn1 was involved in skeletal muscle development and played a role in neurological pathways after TCDD exposure. Mutant zebrafish appeared morphologically normal but had significant behavior deficiencies at all life stages, and absence of Wfikkn1 did not significantly alter TCDD-induced behavior effects at all life stages. In conclusion, wfikkn1 did not appear to be significantly involved in TCDD's overt toxicity but is likely a necessary functional member of the AHR signaling cascade.

摘要

芳香烃受体 (AHR) 是脊椎动物发育所必需的,也可被外源性化学物质激活,包括多环芳烃 (PAHs) 和 2,3,7,8-四氯二苯并对二恶英 (TCDD)。AHR 的激活已得到充分研究,但下游分子信号事件的作用在很大程度上仍不清楚。在先前的研究中,我们对暴露于几种 PAHs 和 TCDD 的 48 小时后孵化的斑马鱼进行了转录组学分析,发现 wfikkn1 与 cyp1a(AHR 激活的标志物)高度共表达。因此,我们假设 wfikkn1 在 AHR 信号转导中的作用,并表明在暴露于 TCDD 的发育中的斑马鱼中,wfikkn1 的表达依赖于 Ahr2(人类 AHR 的斑马鱼同源物)。为了对 wfikkn1 进行功能表征,我们构建了一个 CRISPR-Cas9 突变系,该突变系在 wfikkn1 的外显子中缺失了 16 个碱基对,并使野生型和突变型斑马鱼暴露于二甲基亚砜或 TCDD 中。48 小时时的 mRNA 测序揭示了超过 700 个基因在每对处理组合之间存在差异表达(p < .05,log2FC > 1),这表明 wfikkn1 在改变 48 小时时的转录组和 TCDD 诱导的表达变化方面发挥着重要作用。对 48 小时时野生型和突变型斑马鱼的基于质谱的蛋白质组学分析揭示了 325 个有显著差异表达的蛋白质。功能富集表明,wfikkn1 参与骨骼肌发育,并在 TCDD 暴露后在神经通路中发挥作用。突变型斑马鱼在形态上似乎正常,但在所有生命阶段都存在明显的行为缺陷,并且 Wfikkn1 的缺失并没有在所有生命阶段显著改变 TCDD 诱导的行为效应。总之,wfikkn1 似乎并没有明显参与 TCDD 的明显毒性,但很可能是 AHR 信号级联中的一个必要功能成员。

相似文献

1
The Ahr2-Dependent wfikkn1 Gene Influences Zebrafish Transcriptome, Proteome, and Behavior.Ahr2 依赖性 wfikkn1 基因影响斑马鱼转录组、蛋白质组和行为。
Toxicol Sci. 2022 May 26;187(2):325-344. doi: 10.1093/toxsci/kfac037.
2
Distinct roles of two zebrafish AHR repressors (AHRRa and AHRRb) in embryonic development and regulating the response to 2,3,7,8-tetrachlorodibenzo-p-dioxin.两种斑马鱼芳烃受体阻遏物(AHRRa和AHRRb)在胚胎发育及调节对2,3,7,8-四氯二苯并对二恶英的反应中的不同作用。
Toxicol Sci. 2009 Aug;110(2):426-41. doi: 10.1093/toxsci/kfp116. Epub 2009 Jun 3.
3
Tissue-specific expression of AHR2, ARNT2, and CYP1A in zebrafish embryos and larvae: effects of developmental stage and 2,3,7,8-tetrachlorodibenzo-p-dioxin exposure.斑马鱼胚胎和幼体中芳烃受体2(AHR2)、芳香烃受体核转运蛋白2(ARNT2)和细胞色素P450 1A(CYP1A)的组织特异性表达:发育阶段和2,3,7,8-四氯二苯并对二恶英暴露的影响
Toxicol Sci. 2002 Aug;68(2):403-19. doi: 10.1093/toxsci/68.2.403.
4
ahr2, But Not ahr1a or ahr1b, Is Required for Craniofacial and Fin Development and TCDD-dependent Cardiotoxicity in Zebrafish.ahr2,但不是 ahr1a 或 ahr1b,是斑马鱼颅面和鳍发育以及 TCDD 依赖性心脏毒性所必需的。
Toxicol Sci. 2019 Jul 1;170(1):25-44. doi: 10.1093/toxsci/kfz075.
5
AHR2 mutant reveals functional diversity of aryl hydrocarbon receptors in zebrafish.AHR2 突变体揭示了鱼类中芳香烃受体的功能多样性。
PLoS One. 2012;7(1):e29346. doi: 10.1371/journal.pone.0029346. Epub 2012 Jan 5.
6
Signaling Events Downstream of AHR Activation That Contribute to Toxic Responses: The Functional Role of an AHR-Dependent Long Noncoding RNA () Using the Zebrafish Model.AHR 激活下游导致毒性反应的信号事件:使用斑马鱼模型的 AHR 依赖性长非编码 RNA () 的功能作用。
Environ Health Perspect. 2018 Nov;126(11):117002. doi: 10.1289/EHP3281.
7
Zebrafish cardiotoxicity: the effects of CYP1A inhibition and AHR2 knockdown following exposure to weak aryl hydrocarbon receptor agonists.斑马鱼心脏毒性:暴露于弱芳烃受体激动剂后CYP1A抑制和AHR2基因敲低的影响
Environ Sci Pollut Res Int. 2015 Jun;22(11):8329-38. doi: 10.1007/s11356-014-3969-2. Epub 2014 Dec 23.
8
2,3,7,8-Tetrachlorodibenzo-p-dioxin upregulates FoxQ1b in zebrafish jaw primordium.2,3,7,8-四氯二苯并对二恶英上调斑马鱼下颚原基中的 FoxQ1b。
Chem Res Toxicol. 2010 Mar 15;23(3):480-7. doi: 10.1021/tx9003165.
9
Role of aryl hydrocarbon receptor in mesencephalic circulation failure and apoptosis in zebrafish embryos exposed to 2,3,7,8-tetrachlorodibenzo-p-dioxin.芳烃受体在暴露于2,3,7,8-四氯二苯并对二恶英的斑马鱼胚胎中脑循环衰竭和细胞凋亡中的作用。
Toxicol Sci. 2004 Jan;77(1):109-16. doi: 10.1093/toxsci/kfh023. Epub 2003 Dec 3.
10
AHR2 required for normal behavioral responses and proper development of the skeletal and reproductive systems in zebrafish.AHR2 对于斑马鱼正常的行为反应和骨骼及生殖系统的正常发育是必需的。
PLoS One. 2018 Mar 1;13(3):e0193484. doi: 10.1371/journal.pone.0193484. eCollection 2018.

引用本文的文献

1
Developmental toxicity of alkylated PAHs and substituted phenanthrenes: Structural nuances drive diverse toxicity and AHR activation.烷基化多环芳烃和取代菲的发育毒性:结构细微差别导致不同的毒性和芳烃受体激活。
Chemosphere. 2025 Feb;370:143894. doi: 10.1016/j.chemosphere.2024.143894. Epub 2024 Dec 10.
2
Aryl hydrocarbon receptor-dependent toxicity by retene requires metabolic competence.芘依赖于芳烃受体的毒性需要代谢能力。
Toxicol Sci. 2024 Nov 1;202(1):50-68. doi: 10.1093/toxsci/kfae098.
3
Impact of phenanthrene co-administration on the toxicokinetics of benzo[a]pyrene in humans. UPLC-accelerator mass spectrometry following oral microdosing.苊共染对人体中苯并[a]芘毒代动力学的影响。口服微剂量后 UPLC-加速质谱法。
Chem Biol Interact. 2023 Sep 1;382:110608. doi: 10.1016/j.cbi.2023.110608. Epub 2023 Jun 25.
4
A CRISPR-Cas9 mutation in sox9b long intergenic noncoding RNA (slincR) affects zebrafish development, behavior, and regeneration.Sox9b 长链非编码 RNA (slincR) 中的 CRISPR-Cas9 突变影响斑马鱼的发育、行为和再生。
Toxicol Sci. 2023 Jul 28;194(2):153-166. doi: 10.1093/toxsci/kfad050.
5
Coupling Environmental Whole Mixture Toxicity Screening with Unbiased RNA-Seq Reveals Site-Specific Biological Responses in Zebrafish.将环境全混合物毒性筛选与无偏RNA测序相结合揭示斑马鱼的位点特异性生物学反应。
Toxics. 2023 Feb 21;11(3):201. doi: 10.3390/toxics11030201.
6
Studying the Impact of Persistent Organic Pollutants Exposure on Human Health by Proteomic Analysis: A Systematic Review.采用蛋白质组学分析研究持久性有机污染物暴露对人类健康的影响:系统评价。
Int J Mol Sci. 2022 Nov 17;23(22):14271. doi: 10.3390/ijms232214271.
7
Concentration-response gene expression analysis in zebrafish reveals phenotypically-anchored transcriptional responses to retene.斑马鱼中的浓度-反应基因表达分析揭示了对惹烯的表型锚定转录反应。
Front Toxicol. 2022 Aug 25;4:950503. doi: 10.3389/ftox.2022.950503. eCollection 2022.

本文引用的文献

1
Gene co-expression network analysis in zebrafish reveals chemical class specific modules.斑马鱼基因共表达网络分析揭示化学类特异性模块。
BMC Genomics. 2021 Sep 13;22(1):658. doi: 10.1186/s12864-021-07940-4.
2
A Review of the Functional Roles of the Zebrafish Aryl Hydrocarbon Receptors.斑马鱼芳香烃受体的功能作用研究综述
Toxicol Sci. 2020 Dec 1;178(2):215-238. doi: 10.1093/toxsci/kfaa143.
3
Rapid well-plate assays for motor and social behaviors in larval zebrafish.快速微孔板检测幼虫斑马鱼的运动和社交行为。
Behav Brain Res. 2020 Aug 5;391:112625. doi: 10.1016/j.bbr.2020.112625. Epub 2020 May 16.
4
Aryl Hydrocarbon Receptor Mediates Larval Zebrafish Fin Duplication Following Exposure to Benzofluoranthenes.芳基烃受体介导苯并荧蒽暴露后斑马鱼幼鱼鳍重复的发生。
Toxicol Sci. 2020 Jul 1;176(1):46-64. doi: 10.1093/toxsci/kfaa063.
5
Genetic compensation in a stable slc25a46 mutant zebrafish: A case for using F0 CRISPR mutagenesis to study phenotypes caused by inherited disease.稳定的 slc25a46 突变斑马鱼中的遗传补偿:使用 F0 CRISPR 诱变来研究由遗传疾病引起的表型的案例。
PLoS One. 2020 Mar 24;15(3):e0230566. doi: 10.1371/journal.pone.0230566. eCollection 2020.
6
Experience-dependent development of visual sensitivity in larval zebrafish.幼鱼斑马鱼视觉敏感性的经验依赖性发育。
Sci Rep. 2019 Dec 12;9(1):18931. doi: 10.1038/s41598-019-54958-6.
7
Ensembl 2020.Ensembl 2020.
Nucleic Acids Res. 2020 Jan 8;48(D1):D682-D688. doi: 10.1093/nar/gkz966.
8
GenBank.GenBank
Nucleic Acids Res. 2020 Jan 8;48(D1):D84-D86. doi: 10.1093/nar/gkz956.
9
Coupling Genome-wide Transcriptomics and Developmental Toxicity Profiles in Zebrafish to Characterize Polycyclic Aromatic Hydrocarbon (PAH) Hazard.将全基因组转录组学和斑马鱼发育毒性特征相结合,以表征多环芳烃(PAH)危害。
Int J Mol Sci. 2019 May 25;20(10):2570. doi: 10.3390/ijms20102570.
10
Signaling Events Downstream of AHR Activation That Contribute to Toxic Responses: The Functional Role of an AHR-Dependent Long Noncoding RNA () Using the Zebrafish Model.AHR 激活下游导致毒性反应的信号事件:使用斑马鱼模型的 AHR 依赖性长非编码 RNA () 的功能作用。
Environ Health Perspect. 2018 Nov;126(11):117002. doi: 10.1289/EHP3281.