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微卫星标记揭示的地方病的遗传结构。

Genetic structure of the endemic revealed by microsatellite markers.

作者信息

Minh Nguyen Duc, Lan Phan Nguyen Hong, Minh Nguyen Tam

机构信息

Institute of Genome Research, Vietnam Academy of Science and Technology, 18 Hoang Quoc Viet, Cau Giay, Hanoi 100000, Vietnam.

Faculty of Biotechnology, Graduate University of Science and Technology, Vietnam Academy of Science and Technology, 18 Hoang Quoc Viet, Cau Giay, Hanoi 100000, Vietnam.

出版信息

AoB Plants. 2022 Feb 23;14(2):plac007. doi: 10.1093/aobpla/plac007. eCollection 2022 Apr.

DOI:10.1093/aobpla/plac007
PMID:35440974
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9011383/
Abstract

Anthropogenic disturbances in tropical forests often affect the genetic diversity of a species. is an endangered species in the tropical forests of south-eastern Vietnam, both from its over-exploitation and habitat loss. Therefore, knowledge of population genetic diversity and population structure is essential for identifying the species conservation measures. In the present study, we evaluated genetic diversity and population structure using nine microsatellites for 183 individual trees from eight populations, representing the distribution range of in Vietnam. Two clustering approaches (Bayesian analysis and discriminant analysis of principal components) revealed that all studied individuals clustered into three genetic groups, which were related to gene flow across the range of in the lowland tropical forests of south-eastern Vietnam. Limited gene flow was implicated in anthropogenic disturbance. Genetic differentiation among populations was relatively low (the Weir and Cockerham index of 0.122 and the Hedrick index of 0.149) and showed significant differentiation. The genetic variability of the populations was low ( = 0.298 and = 0.324), which suggested the negative effects of habitat degradation and over-exploitation. Our studies also determined that populations can have undergone recent bottlenecks. We recommend conservation activities for this species based on these results.

摘要

热带森林中的人为干扰常常影响物种的遗传多样性。[物种名称]是越南东南部热带森林中的濒危物种,这是由过度开发和栖息地丧失共同导致的。因此,了解种群遗传多样性和种群结构对于确定物种保护措施至关重要。在本研究中,我们使用9个微卫星标记对来自8个种群的183棵个体树进行分析,这些种群代表了[物种名称]在越南的分布范围,以此评估其遗传多样性和种群结构。两种聚类方法(贝叶斯分析和主成分判别分析)表明,所有研究个体聚为三个遗传组,这与越南东南部低地热带森林中[物种名称]分布范围内的基因流有关。有限的基因流与人为干扰有关。种群间的遗传分化相对较低(韦尔和科克伦指数为0.122,赫德里克指数为0.149),但显示出显著差异。种群的遗传变异性较低([具体遗传多样性指标1]=0.298,[具体遗传多样性指标2]=0.324),这表明栖息地退化和过度开发产生了负面影响。我们的研究还确定[物种名称]种群可能经历了近期的瓶颈效应。基于这些结果,我们为该物种推荐了保护措施。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/14d3/9011383/758103737ba0/plac007_fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/14d3/9011383/dd12055d2274/plac007_fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/14d3/9011383/758103737ba0/plac007_fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/14d3/9011383/dd12055d2274/plac007_fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/14d3/9011383/758103737ba0/plac007_fig2.jpg

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本文引用的文献

1
A COMPARISON OF THREE INDIRECT METHODS FOR ESTIMATING AVERAGE LEVELS OF GENE FLOW.三种估算基因流平均水平的间接方法比较
Evolution. 1989 Nov;43(7):1349-1368. doi: 10.1111/j.1558-5646.1989.tb02587.x.
2
ESTIMATING F-STATISTICS FOR THE ANALYSIS OF POPULATION STRUCTURE.估计用于群体结构分析的F统计量
Evolution. 1984 Nov;38(6):1358-1370. doi: 10.1111/j.1558-5646.1984.tb05657.x.
3
Conservation Genetics: Techniques and Fundamentals.保护遗传学:技术与基础
Ecol Appl. 1992 Feb;2(1):30-46. doi: 10.2307/1941887.
4
Genetic variation in and spatial structure of natural populations of Dipterocarpus alatus (Dipterocarpaceae) determined using single sequence repeat markers.利用单序列重复标记确定羯布罗香(龙脑香科)自然种群的遗传变异和空间结构。
Genet Mol Res. 2014 Jul 24;13(3):5378-86. doi: 10.4238/2014.July.24.17.
5
GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update.GenAlEx 6.5:Excel 中的遗传分析。用于教学和研究的种群遗传软件--更新。
Bioinformatics. 2012 Oct 1;28(19):2537-9. doi: 10.1093/bioinformatics/bts460. Epub 2012 Jul 20.
6
genepop'007: a complete re-implementation of the genepop software for Windows and Linux.genepop'007:一个用于 Windows 和 Linux 的 genepop 软件的完全重新实现。
Mol Ecol Resour. 2008 Jan;8(1):103-6. doi: 10.1111/j.1471-8286.2007.01931.x.
7
Has the Earth's sixth mass extinction already arrived?地球是否已经进入第六次大灭绝?
Nature. 2011 Mar 3;471(7336):51-7. doi: 10.1038/nature09678.
8
The population genetic consequences of habitat fragmentation for plants.生境破碎化对植物种群遗传的影响。
Trends Ecol Evol. 1996 Oct;11(10):413-8. doi: 10.1016/0169-5347(96)10045-8.
9
Discriminant analysis of principal components: a new method for the analysis of genetically structured populations.主成分判别分析:一种用于分析遗传结构群体的新方法。
BMC Genet. 2010 Oct 15;11:94. doi: 10.1186/1471-2156-11-94.
10
Successful cross-amplification of Shorea microsatellites reveals genetic variation in the tropical tree, Shorea robusta Gaertn.娑罗双树微卫星的成功交叉扩增揭示了热带树木娑罗双(Shorea robusta Gaertn.)的遗传变异。
Hereditas. 2009 Feb;146(1):29-32. doi: 10.1111/j.1601-5223.2009.02070.x.