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利用生物发光报告质粒的高通量转导筛选 中的转录关联。

Screening transcriptional connections in using high-throughput transduction of bioluminescent reporter plasmids.

机构信息

Vanderbilt Institute for Infection, Immunology and Inflammation, Vanderbilt University Medical Center, Nashville, TN 37232, USA.

Department of Pathology, Microbiology, and Immunology, Vanderbilt University Medical Center, Nashville, TN 37232, USA.

出版信息

Microbiology (Reading). 2022 Apr;168(4). doi: 10.1099/mic.0.001174.

Abstract

Characterization of transcriptional networks is one of the main strategies used to understand how bacteria interact with their environment. To reveal novel regulatory elements in the human pathogen , we adapted a traditional transduction protocol to be used in a high-throughput format in combination with the publicly available Nebraska Transposon Mutant Library. Specifically, plasmid transductions are performed in 96-well format, so that a single plasmid can be simultaneously transferred into numerous recipient strains. When used in conjunction with bioluminescent reporter constructs, this strategy enables parallel and continuous monitoring of downstream transcriptional effects of hundreds of defined mutations. Here, we use this workflow in a proof-of-concept study to identify novel regulators of the staphylococcal metalloprotease aureolysin. Importantly, this strategy can be utilized with any other bacterium where plasmid transduction is possible, making it a versatile and efficient tool to probe transcriptional regulatory connections.

摘要

转录网络的特征分析是理解细菌如何与环境相互作用的主要策略之一。为了揭示人类病原体中的新调控元件,我们改编了传统的转导方案,使其能够以高通量的形式与公开可用的内布拉斯加转座子突变体库结合使用。具体来说,质粒转导在 96 孔格式中进行,因此单个质粒可以同时被转移到多个受体菌株中。当与生物发光报告基因构建体结合使用时,该策略可平行且连续监测数百个定义突变的下游转录效应。在这里,我们在一个概念验证研究中使用此工作流程来鉴定金黄色葡萄球菌金属蛋白酶 aureolysin 的新调控因子。重要的是,该策略可用于任何其他可进行质粒转导的细菌,使其成为探测转录调控连接的通用且高效的工具。

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