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陆地植物中转座元件的特异性与动态变化

Specificities and Dynamics of Transposable Elements in Land Plants.

作者信息

Mhiri Corinne, Borges Filipe, Grandbastien Marie-Angèle

机构信息

Université Paris-Saclay, INRAE, AgroParisTech, Institut Jean-Pierre Bourgin (IJPB), 78000 Versailles, France.

出版信息

Biology (Basel). 2022 Mar 23;11(4):488. doi: 10.3390/biology11040488.

Abstract

Transposable elements (TEs) are important components of most plant genomes. These mobile repetitive sequences are highly diverse in terms of abundance, structure, transposition mechanisms, activity and insertion specificities across plant species. This review will survey the different mechanisms that may explain the variability of TE patterns in land plants, highlighting the tight connection between TE dynamics and host genome specificities, and their co-evolution to face and adapt to a changing environment. We present the current TE classification in land plants, and describe the different levels of genetic and epigenetic controls originating from the plant, the TE itself, or external environmental factors. Such overlapping mechanisms of TE regulation might be responsible for the high diversity and dynamics of plant TEs observed in nature.

摘要

转座元件(TEs)是大多数植物基因组的重要组成部分。这些可移动的重复序列在植物物种间的丰度、结构、转座机制、活性和插入特异性方面高度多样。本综述将探讨可能解释陆地植物中转座元件模式变异性的不同机制,强调转座元件动态与宿主基因组特异性之间的紧密联系,以及它们为应对和适应不断变化的环境而共同进化的情况。我们介绍了陆地植物中当前的转座元件分类,并描述了源自植物、转座元件本身或外部环境因素的不同层次的遗传和表观遗传控制。这种转座元件调控的重叠机制可能是自然界中观察到的植物转座元件高度多样性和动态性的原因。

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