Shin Hyo-Jae, Gil Minchan, Lee Im-Soon
Department of Biological Sciences, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 05029, Korea.
Department of Stem Cell and Regenerative Biotechnology, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 05029, Korea.
J Pers Med. 2022 Mar 28;12(4):534. doi: 10.3390/jpm12040534.
Aberrant expression of collagen type IV alpha chain 1 () can influence tumor cell behavior. To examine the association of expression in the tumor microenvironment (TME) with tumor progression, we performed bioinformatics analyses of The Cancer Genome Atlas RNA sequencing and RNA microarray datasets available in public databases and identified upregulated expression in most examined tumor types compared to their normal counterparts. The elevated expression of was correlated with low survival rates of patients with low-grade glioma, pancreatic adenocarcinoma, skin cutaneous melanoma, and stomach adenocarcinoma, thus suggesting its potential use as a biomarker for the poor prognosis of these tumors. However, was mostly expressed in adjacent stromal cells, such as cancer-associated fibroblasts (CAFs) and endothelial cells. Additionally, expression was highly correlated with the signatures of CAFs and endothelial cells in all four tumor types. The expression of marker genes for the infiltration of pro-tumoral immune cells, such as Treg, M2, and TAM, and those of immunosuppressive cytokines exhibited very strong positive correlations with expression. Collectively, our data suggest that overexpression in stromal cells may be a potential regulator of tumor-supporting TME composition associated with poor prognosis.
IV型胶原蛋白α链1()的异常表达可影响肿瘤细胞行为。为了研究肿瘤微环境(TME)中该表达与肿瘤进展的关联,我们对公共数据库中可用的癌症基因组图谱RNA测序和RNA微阵列数据集进行了生物信息学分析,并发现与正常对应物相比,在大多数检测的肿瘤类型中该表达上调。该表达的升高与低级别胶质瘤、胰腺腺癌、皮肤黑色素瘤和胃腺癌患者的低生存率相关,因此表明其有可能作为这些肿瘤预后不良的生物标志物。然而,该主要在相邻的基质细胞中表达,如癌症相关成纤维细胞(CAFs)和内皮细胞。此外,在所有四种肿瘤类型中,该表达与CAFs和内皮细胞的特征高度相关。促肿瘤免疫细胞(如Treg、M2和TAM)浸润的标记基因表达以及免疫抑制细胞因子的表达与该表达呈现非常强的正相关。总体而言,我们的数据表明基质细胞中该的过表达可能是与预后不良相关的肿瘤支持性TME组成的潜在调节因子。