• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

蛋白质结构波动的见解:中间状态在调节生物学功能中的意义。

Insights into Fluctuations of Structure of Proteins: Significance of Intermediary States in Regulating Biological Functions.

作者信息

Parray Zahoor Ahmad, Shahid Mohammad, Islam Asimul

机构信息

Centre for Interdisciplinary Research in Basic Sciences, Jamia Millia Islamia, New Delhi 110025, India.

Department of Chemistry, Indian Institute of Technology Delhi, IIT Campus, Hauz Khas, New Delhi 110016, India.

出版信息

Polymers (Basel). 2022 Apr 11;14(8):1539. doi: 10.3390/polym14081539.

DOI:10.3390/polym14081539
PMID:35458289
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9025146/
Abstract

Proteins are indispensable to cellular communication and metabolism. The structure on which cells and tissues are developed is deciphered from proteins. To perform functions, proteins fold into a three-dimensional structural design, which is specific and fundamentally determined by their characteristic sequence of amino acids. Few of them have structural versatility, allowing them to adapt their shape to the task at hand. The intermediate states appear momentarily, while protein folds from denatured (D) ⇔ native (N), which plays significant roles in cellular functions. Prolific effort needs to be taken in characterizing these intermediate species if detected during the folding process. Protein folds into its native structure through definite pathways, which involve a limited number of transitory intermediates. Intermediates may be essential in protein folding pathways and assembly in some cases, as well as misfolding and aggregation folding pathways. These intermediate states help to understand the machinery of proper folding in proteins. In this review article, we highlight the various intermediate states observed and characterized so far under in vitro conditions. Moreover, the role and significance of intermediates in regulating the biological function of cells are discussed clearly.

摘要

蛋白质对于细胞通讯和新陈代谢不可或缺。细胞和组织发育所依赖的结构是由蛋白质解析而来的。为了执行功能,蛋白质折叠成三维结构设计,这种结构是特定的,并且从根本上由其独特的氨基酸序列决定。它们中很少有具有结构通用性的,能够使其形状适应手头的任务。当蛋白质从变性(D)⇌天然(N)状态折叠时,中间状态会瞬间出现,这在细胞功能中起着重要作用。如果在折叠过程中检测到这些中间物种,就需要付出大量努力来对其进行表征。蛋白质通过明确的途径折叠成其天然结构,这些途径涉及数量有限的瞬时中间体。在某些情况下,中间体可能在蛋白质折叠途径和组装中至关重要,在错误折叠和聚集折叠途径中也是如此。这些中间状态有助于理解蛋白质正确折叠的机制。在这篇综述文章中,我们重点介绍了迄今为止在体外条件下观察和表征的各种中间状态。此外,还清晰地讨论了中间体在调节细胞生物学功能中的作用和意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0441/9025146/5676455d5622/polymers-14-01539-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0441/9025146/c1d08474a2a8/polymers-14-01539-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0441/9025146/5676455d5622/polymers-14-01539-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0441/9025146/c1d08474a2a8/polymers-14-01539-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0441/9025146/5676455d5622/polymers-14-01539-g002.jpg

相似文献

1
Insights into Fluctuations of Structure of Proteins: Significance of Intermediary States in Regulating Biological Functions.蛋白质结构波动的见解:中间状态在调节生物学功能中的意义。
Polymers (Basel). 2022 Apr 11;14(8):1539. doi: 10.3390/polym14081539.
2
Macromolecular crowding: chemistry and physics meet biology (Ascona, Switzerland, 10-14 June 2012).大分子拥挤现象:化学与物理邂逅生物学(瑞士阿斯科纳,2012年6月10日至14日)
Phys Biol. 2013 Aug;10(4):040301. doi: 10.1088/1478-3975/10/4/040301. Epub 2013 Aug 2.
3
The how's and why's of protein folding intermediates.蛋白质折叠中间体的方式和原因。
Arch Biochem Biophys. 2013 Mar;531(1-2):14-23. doi: 10.1016/j.abb.2012.10.006. Epub 2012 Oct 23.
4
Protein folding, unfolding and misfolding: role played by intermediate States.蛋白质折叠、去折叠和错误折叠:中间状态所起的作用。
Mini Rev Med Chem. 2008 Jan;8(1):57-62. doi: 10.2174/138955708783331522.
5
Ligand binding and hydration in protein misfolding: insights from studies of prion and p53 tumor suppressor proteins.配体结合与蛋白质错误折叠中的水合作用:朊病毒和抑癌蛋白 p53 结构研究的新见解。
Acc Chem Res. 2010 Feb 16;43(2):271-9. doi: 10.1021/ar900179t.
6
Solution structure of a protein denatured state and folding intermediate.蛋白质变性状态和折叠中间体的溶液结构
Nature. 2005 Oct 13;437(7061):1053-6. doi: 10.1038/nature04054.
7
Structural insights in the folding of small single-domain proteins.小单结构域蛋白折叠的结构见解
Ital J Biochem. 2003 Dec;52(4):154-61.
8
The Knotted Protein UCH-L1 Exhibits Partially Unfolded Forms under Native Conditions that Share Common Structural Features with Its Kinetic Folding Intermediates.具有纽结结构的蛋白质UCH-L1在天然条件下呈现出部分未折叠形式,这些形式与其动力学折叠中间体具有共同的结构特征。
J Mol Biol. 2016 Jun 5;428(11):2507-2520. doi: 10.1016/j.jmb.2016.04.002. Epub 2016 Apr 8.
9
Structural analysis of kinetic folding intermediates for a TIM barrel protein, indole-3-glycerol phosphate synthase, by hydrogen exchange mass spectrometry and Gō model simulation.通过氢交换质谱法和Gō模型模拟对TIM桶状蛋白吲哚-3-甘油磷酸合酶的动力学折叠中间体进行结构分析。
J Mol Biol. 2007 Nov 23;374(2):528-46. doi: 10.1016/j.jmb.2007.09.024. Epub 2007 Sep 14.
10
Process, Outcomes and Possible Elimination of Aggregation with Special Reference to Heme Proteins; Likely Remediations of Proteinopathies.过程、结果和聚集的可能消除,特别参考血红素蛋白;蛋白构象病的可能修复。
Curr Protein Pept Sci. 2020;21(6):573-583. doi: 10.2174/1389203721666200204122732.

本文引用的文献

1
Targeting a cryptic allosteric site of SIRT6 with small-molecule inhibitors that inhibit the migration of pancreatic cancer cells.用抑制胰腺癌细胞迁移的小分子抑制剂靶向SIRT6的一个隐蔽变构位点。
Acta Pharm Sin B. 2022 Feb;12(2):876-889. doi: 10.1016/j.apsb.2021.06.015. Epub 2021 Jul 2.
2
Activation pathway of a G protein-coupled receptor uncovers conformational intermediates as targets for allosteric drug design.G 蛋白偶联受体的激活途径揭示了构象中间态可作为变构药物设计的靶点。
Nat Commun. 2021 Aug 5;12(1):4721. doi: 10.1038/s41467-021-25020-9.
3
Discovery of cryptic allosteric sites using reversed allosteric communication by a combined computational and experimental strategy.
通过计算与实验相结合的策略利用反向变构通讯发现隐秘变构位点
Chem Sci. 2020 Nov 2;12(1):464-476. doi: 10.1039/d0sc05131d.
4
Interaction of polyethylene glycol with cytochrome c investigated via in vitro and in silico approaches.通过体外和计算方法研究聚乙二醇与细胞色素 c 的相互作用。
Sci Rep. 2021 Mar 19;11(1):6475. doi: 10.1038/s41598-021-85792-4.
5
The change of conditions does not affect Ros87 downhill folding mechanism.条件的变化并不影响 Ros87 下坡折叠机制。
Sci Rep. 2020 Dec 3;10(1):21067. doi: 10.1038/s41598-020-78008-8.
6
The metastable states of proteins.蛋白质的亚稳态。
Protein Sci. 2020 Jul;29(7):1559-1568. doi: 10.1002/pro.3859. Epub 2020 Apr 11.
7
The anti-oxidant enzyme, Prdx6 might have cis-acting regulatory sequence(s).抗氧化酶 Prdx6 可能具有顺式作用调节序列。
Int J Biol Macromol. 2020 Apr 15;149:1139-1150. doi: 10.1016/j.ijbiomac.2020.01.311. Epub 2020 Feb 1.
8
Formation of molten globule state in horse heart cytochrome c under physiological conditions: Importance of soft interactions and spectroscopic approach in crowded milieu.在生理条件下马心细胞色素 c 形成熔融球蛋白状态:拥挤环境中软相互作用和光谱方法的重要性。
Int J Biol Macromol. 2020 Apr 1;148:192-200. doi: 10.1016/j.ijbiomac.2020.01.119. Epub 2020 Jan 13.
9
Small Heat Shock Proteins, Big Impact on Protein Aggregation in Neurodegenerative Disease.小分子热休克蛋白对神经退行性疾病中蛋白质聚集有重大影响。
Front Pharmacol. 2019 Sep 18;10:1047. doi: 10.3389/fphar.2019.01047. eCollection 2019.
10
A look back at the molten globule state of proteins: thermodynamic aspects.蛋白质熔球态的回顾:热力学方面
Biophys Rev. 2019 Jun;11(3):365-375. doi: 10.1007/s12551-019-00527-0. Epub 2019 May 4.