Center for Phage Technology, Department of Biochemistry and Biophysics, Texas A&M University, College Station, Texas, USA.
mBio. 2022 Jun 28;13(3):e0081322. doi: 10.1128/mbio.00813-22. Epub 2022 Apr 26.
Bacteriophage Mu is a paradigm coliphage studied mainly because of its use of transposition for genome replication. However, in extensive nonsense mutant screens, only one lysis gene has been identified, the endolysin gp22. This is surprising because in Gram-negative hosts, lysis by phages has been shown to require proteins which disrupt all three layers of the cell envelope. Usually this involves a holin, an endolysin, and a spanin targeting the cytoplasmic membrane, peptidoglycan (PG), and outer membrane (OM), respectively, with the holin determining the timing of lysis initiation. Here, we demonstrate that gp22 is a signal-anchor-release (SAR) endolysin and identify gp23 and gp23.1 as two-component spanin subunits. However, we find that Mu lacks a holin and instead encodes a membrane-tethered cytoplasmic protein, gp25, which is required for the release of the SAR endolysin. Mutational analysis showed that this dependence on gp25 is conferred by lysine residues at positions 6 and 7 of the short cytoplasmic domain of gp22. gp25, which we designate as a releasin, also facilitates the release of SAR endolysins from other phages. Moreover, the entire length of gp25, including its N-terminal transmembrane domain, belongs to a protein family, DUF2730, found in many Mu-like phages, including those with cytoplasmic endolysins. These results are discussed in terms of models for the evolution and mechanism of releasin function and a rationale for Mu lysis without holin control. Host cell lysis is the terminal event of the bacteriophage infection cycle. In Gram-negative hosts, lysis requires proteins that disrupt each of the three cell envelope components, only one of which has been identified in Mu: the endolysin gp22. We show that gp22 can be characterized as a SAR endolysin, a muralytic enzyme that activates upon release from the membrane to degrade the cell wall. Furthermore, we identify genes and as spanin subunits used for outer membrane disruption. Significantly, we demonstrate that Mu is the first known phage to lack a holin, a protein that disrupts the inner membrane and is traditionally known to release endolysins. In its stead, we report the discovery of a lysis protein, termed the releasin, which Mu uses for SAR endolysin release. This is an example of a system where the dynamic membrane localization of one protein is controlled by a secondary protein.
噬菌体 Mu 是一种典范的大肠杆菌噬菌体,主要因其转座作用用于基因组复制而被研究。然而,在广泛的无意义突变筛选中,只鉴定出一个裂解基因,即溶菌酶 gp22。这令人惊讶,因为在革兰氏阴性宿主中,噬菌体的裂解已被证明需要破坏细胞包膜的所有三层的蛋白质。通常,这涉及一个孔蛋白、一个溶菌酶和一个靶向细胞质膜、肽聚糖(PG)和外膜(OM)的间隔蛋白,其中孔蛋白决定裂解起始的时间。在这里,我们证明 gp22 是一种信号-锚释放(SAR)溶菌酶,并鉴定出 gp23 和 gp23.1 为两成分间隔蛋白亚基。然而,我们发现 Mu 缺乏孔蛋白,而是编码一种膜结合的细胞质蛋白 gp25,gp25 是 SAR 溶菌酶释放所必需的。突变分析表明,gp22 短细胞质结构域中第 6 和第 7 位的赖氨酸残基赋予了对 gp25 的这种依赖性。我们将 gp25 命名为释放因子,它还促进了 SAR 溶菌酶从其他噬菌体中的释放。此外,gp25 的全长,包括其 N 端跨膜结构域,属于一种蛋白家族,DUF2730,在许多 Mu 样噬菌体中都有发现,包括那些具有细胞质溶菌酶的噬菌体。这些结果从释放因子功能的进化和机制模型以及 Mu 裂解无需孔蛋白控制的原理方面进行了讨论。宿主细胞裂解是噬菌体感染周期的终末事件。在革兰氏阴性宿主中,裂解需要破坏每个细胞包膜成分的蛋白质,而 Mu 中只鉴定出一种:溶菌酶 gp22。我们表明,gp22 可以被描述为 SAR 溶菌酶,一种壁降解酶,在从膜释放后激活以降解细胞壁。此外,我们鉴定了基因和作为用于外膜破坏的间隔蛋白亚基。重要的是,我们证明 Mu 是第一个已知缺乏孔蛋白的噬菌体,孔蛋白破坏内膜,传统上被认为是释放溶菌酶的蛋白。取而代之的是,我们报告了一种裂解蛋白的发现,称为释放因子,Mu 用它来释放 SAR 溶菌酶。这是一个例子,其中一个蛋白质的动态膜定位由第二个蛋白质控制。