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组蛋白变体 H2A.Z 对植物中响应性基因表达的贡献。

Contribution of the histone variant H2A.Z to expression of responsive genes in plants.

机构信息

Department of Biochemistry, Purdue University, West Lafayette, IN 47906, USA.

Laboratory of Epigenome Biology, Systems Biology Center, National Heart, Lung and Blood Institute, NIH, Bethesda, MD 20892, USA.

出版信息

Semin Cell Dev Biol. 2023 Feb 15;135:85-92. doi: 10.1016/j.semcdb.2022.04.006. Epub 2022 Apr 23.

Abstract

The histone variant H2A.Z plays a critical role in chromatin-based processes such as transcription, replication, and repair in eukaryotes. Although many H2A.Z-associated processes and features are conserved in plants and animals, a distinguishing feature of plant chromatin is the enrichment of H2A.Z in the bodies of genes that exhibit dynamic expression, particularly in response to differentiation and the environment. Recent work sheds new light on the plant machinery that enables dynamic changes in H2A.Z enrichment and identifies additional chromatin-based pathways that contribute to transcriptional properties of H2A.Z-enriched chromatin. In particular, analysis of a variety of responsive loci reveals a repressive role for H2A.Z in expression of responsive genes and identifies roles for SWR1 and INO80 chromatin remodelers in enabling dynamic regulation of H2A.Z levels and transcription. These studies lay the groundwork for understanding how this ancient histone variant is harnessed by plants to enable responsive and dynamic gene expression (Graphical Abstract).

摘要

组蛋白变体 H2A.Z 在真核生物的染色质相关过程中发挥着关键作用,如转录、复制和修复。尽管许多与 H2A.Z 相关的过程和特征在植物和动物中是保守的,但植物染色质的一个显著特征是富含 H2A.Z 的基因体,这些基因表现出动态表达,特别是对分化和环境的响应。最近的研究揭示了植物中使 H2A.Z 富集发生动态变化的机制,并确定了其他有助于富含 H2A.Z 的染色质转录特性的染色质途径。特别是,对各种响应性基因座的分析揭示了 H2A.Z 在响应性基因表达中的抑制作用,并确定了 SWR1 和 INO80 染色质重塑因子在动态调节 H2A.Z 水平和转录中的作用。这些研究为理解植物如何利用这种古老的组蛋白变体来实现响应性和动态基因表达奠定了基础(图表摘要)。

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