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全基因组 CRISPR 敲除筛选发现 PLAC8 是 SARS-CoV-2 等相关冠状病毒感染的必需因素。

Genomewide CRISPR knockout screen identified PLAC8 as an essential factor for SADS-CoVs infection.

机构信息

Department of Epidemiology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27514.

Marsico Lung Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC 27514.

出版信息

Proc Natl Acad Sci U S A. 2022 May 3;119(18):e2118126119. doi: 10.1073/pnas.2118126119. Epub 2022 Apr 27.

Abstract

Zoonotic transmission of coronaviruses poses an ongoing threat to human populations. Endemic outbreaks of swine acute diarrhea syndrome coronavirus (SADS-CoV) have caused severe economic losses in the pig industry and have the potential to cause human outbreaks. Currently, there are no vaccines or specific antivirals against SADS-CoV, and our limited understanding of SADS-CoV host entry factors could hinder prompt responses to a potential human outbreak. Using a genomewide CRISPR knockout screen, we identified placenta-associated 8 protein (PLAC8) as an essential host factor for SADS-CoV infection. Knockout of PLAC8 abolished SADS-CoV infection, which was restored by complementing PLAC8 from multiple species, including human, rhesus macaques, mouse, pig, pangolin, and bat, suggesting a conserved infection pathway and susceptibility of SADS-CoV among mammals. Mechanistically, PLAC8 knockout does not affect viral entry; rather, knockout cells displayed a delay and reduction in viral subgenomic RNA expression. In a swine primary intestinal epithelial culture (IEC) infection model, differentiated cultures have high levels of PLAC8 expression and support SADS-CoV replication. In contrast, expanding IECs have low levels of PLAC8 expression and are resistant to SADS-CoV infection. PLAC8 expression patterns translate in vivo; the immunohistochemistry of swine ileal tissue revealed high levels of PLAC8 protein in neonatal compared to adult tissue, mirroring the known SADS-CoV pathogenesis in neonatal piglets. Overall, PLAC8 is an essential factor for SADS-CoV infection and may serve as a promising target for antiviral development for potential pandemic SADS-CoV.

摘要

人畜共患的冠状病毒传播对人类构成持续威胁。猪急性腹泻综合征冠状病毒(SADS-CoV)的地方性爆发给养猪业造成了严重的经济损失,并有可能引发人类疫情。目前,针对 SADS-CoV 尚无疫苗或特效抗病毒药物,我们对 SADS-CoV 宿主进入因子的了解有限,可能会阻碍对潜在人类疫情的及时应对。通过全基因组 CRISPR 敲除筛选,我们鉴定出胎盘相关蛋白 8(PLAC8)是 SADS-CoV 感染的必需宿主因子。PLAC8 敲除可完全抑制 SADS-CoV 感染,而来自多种物种(包括人、恒河猴、鼠、猪、穿山甲和蝙蝠)的 PLAC8 互补则可恢复感染,提示 SADS-CoV 在哺乳动物中存在保守的感染途径和易感性。机制上,PLAC8 敲除不影响病毒进入;相反,敲除细胞的病毒亚基因组 RNA 表达延迟且减少。在猪原代肠上皮细胞(IEC)感染模型中,分化培养物中高水平表达 PLAC8 并支持 SADS-CoV 复制。相比之下,扩增的 IEC 中 PLAC8 表达水平低,且对 SADS-CoV 感染具有抗性。PLAC8 的表达模式在体内得到了验证;猪回肠组织的免疫组化显示,与成年组织相比,新生仔猪组织中 PLAC8 蛋白水平较高,这与已知的 SADS-CoV 在新生仔猪中的发病机制相吻合。综上所述,PLAC8 是 SADS-CoV 感染的必需因子,可能成为针对潜在大流行的 SADS-CoV 的抗病毒药物开发的有前途的靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b6d/9170153/3fdead232c09/pnas.2118126119fig01.jpg

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