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单细胞RNA测序揭示了与3型鸭甲型肝炎病毒(DHAV-3)感染病理生物学相关的肝内特征。

Single-cell RNA sequencing reveals intrahepatic signature related to pathobiology of duck hepatitis A virus type 3 (DHAV-3) infection.

作者信息

Zhang Yunsheng, Ding Dingbang, Li Shaofei, Pan Qiong, Ru Jinlong, Zhao Haonan, Yao Guang, Wei Jie, Wang Shuaiqin, Hou Shuisheng, Wang Xia

机构信息

Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 100193, PR China.

College of Animal Science and Technology, Northwest A&F University, Yangling 712100 Shaanxi, PR China.

出版信息

Poult Sci. 2025 Feb;104(2):104798. doi: 10.1016/j.psj.2025.104798. Epub 2025 Jan 9.

DOI:10.1016/j.psj.2025.104798
PMID:39799860
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11770546/
Abstract

DHAV-3 is one of the main causative agents of duck viral hepatitis (DVH), an acute and highly lethal infectious disease in duck industry. However, the understanding of the pathogenesis of this virus in ducklings is limited. To dissect the molecular characteristics associated with pathobiology of ducklings to DHAV-3, we applied single-cell RNA-sequencing approach to profile the transcriptome of 1.4 million cells from 14 livers of DHAV-3 susceptible (S) and resistant (R) ducklings during viral infection and 4 uninfected healthy controls. We found that infected S ducks exhibited the activation of type I and II interferon pathways with elevated expression of interferon-stimulated genes (ISGs) compared to infected R ducks and healthy controls. DHAV-3 promoted proinflammatory phenotype and inhibited the cell apoptosis pathway of Kupffer cells of S ducks. Furthermore, we observed the elevated expression of host factor PLAC8 in S ducks and validated its ability to facilitate the infection of DHAV-3. We identified significant dysregulation of various genes in complement and coagulation cascades in hepatocytes2 exclusive to S ducks, together with over-secretion of ANGPTL4 from endothelial cells in S ducks which is confirmed to promote cellular migration, suggesting etiology of coagulopathic complications in ducks with severe DVH. Collectively, this study provides a rich resource for understanding the inflammatory immune signatures and cell communications underlying the pathogenesis of DHAV-3 infection, which may accelerate the development of better diagnostic methods and strategies for controlling this disease.

摘要

鸭甲肝病毒3型(DHAV-3)是鸭病毒性肝炎(DVH)的主要致病因子之一,DVH是一种在养鸭业中具有急性和高致死性的传染病。然而,对于这种病毒在雏鸭体内的发病机制了解有限。为了剖析与雏鸭对DHAV-3病理生物学相关的分子特征,我们应用单细胞RNA测序方法,对14只DHAV-3易感(S)和抗性(R)雏鸭在病毒感染期间的14个肝脏以及4个未感染的健康对照的140万个细胞的转录组进行了分析。我们发现,与感染的R雏鸭和健康对照相比,感染的S雏鸭表现出I型和II型干扰素途径的激活,干扰素刺激基因(ISGs)表达升高。DHAV-3促进了S雏鸭库普弗细胞的促炎表型并抑制了其细胞凋亡途径。此外,我们观察到S雏鸭中宿主因子PLAC8的表达升高,并验证了其促进DHAV-3感染的能力。我们发现S雏鸭肝细胞中补体和凝血级联反应中的各种基因存在显著失调,同时S雏鸭内皮细胞中血管生成素样蛋白4(ANGPTL4)分泌过多,这被证实可促进细胞迁移,提示严重DVH雏鸭发生凝血病并发症的病因。总体而言,本研究为理解DHAV-3感染发病机制背后的炎症免疫特征和细胞通讯提供了丰富资源,这可能会加速更好的诊断方法和控制该疾病策略的开发。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0841/11770546/2879b179dba5/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0841/11770546/0bc2504a03ba/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0841/11770546/164f03fa25c8/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0841/11770546/6a5f1b24a2a8/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0841/11770546/2b838c5fe6ea/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0841/11770546/efe24aec7f93/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0841/11770546/ff3b9a51bcc9/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0841/11770546/2879b179dba5/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0841/11770546/0bc2504a03ba/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0841/11770546/164f03fa25c8/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0841/11770546/6a5f1b24a2a8/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0841/11770546/2b838c5fe6ea/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0841/11770546/efe24aec7f93/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0841/11770546/ff3b9a51bcc9/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0841/11770546/2879b179dba5/gr7.jpg

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本文引用的文献

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Embryonic growth and effect of embryonic age on quantitative and functional characteristics of duck primary hepatocytes.胚胎生长和胚胎龄对鸭原代肝细胞数量和功能特性的影响。
Poult Sci. 2024 Apr;103(4):103531. doi: 10.1016/j.psj.2024.103531. Epub 2024 Feb 7.
2
Whole-transcriptome sequencing revealed the role of noncoding RNAs in susceptibility and resistance of Pekin ducks to DHAV-3.全转录组测序揭示了非编码 RNA 在中国北京鸭对 DHAV-3 易感性和抗性中的作用。
Poult Sci. 2024 Mar;103(3):103416. doi: 10.1016/j.psj.2023.103416. Epub 2023 Dec 30.
3
Effects of DHAV-3 infection on innate immunity, antioxidant capacity, and lipid metabolism in ducks with different DHAV-3 susceptibilities.
不同易感性鸭呼肠孤病毒 3 型感染对先天免疫、抗氧化能力和脂代谢的影响。
Poult Sci. 2024 Mar;103(3):103374. doi: 10.1016/j.psj.2023.103374. Epub 2023 Dec 12.
4
Plasma lipidome reveals susceptibility and resistance of Pekin ducks to DHAV-3.血浆脂质组揭示了北京鸭对 DHAV-3 的易感性和抗性。
Int J Biol Macromol. 2023 Dec 31;253(Pt 5):127095. doi: 10.1016/j.ijbiomac.2023.127095. Epub 2023 Sep 25.
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Duck hepatitis a virus: Full-length genome-based phylogenetic and phylogeographic view during 1986-2020.鸭甲型肝炎病毒:1986 - 2020年基于全基因组的系统发育和系统地理学观点
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Placenta-specific 8 facilitates the infection of duck hepatitis A virus type 1 by inhibiting the TLR7 MyD88-dependent signaling pathway.胎盘特异性蛋白 8 通过抑制 TLR7-MyD88 依赖性信号通路促进鸭甲型肝炎病毒 1 的感染。
Poult Sci. 2023 Jul;102(7):102724. doi: 10.1016/j.psj.2023.102724. Epub 2023 Apr 16.
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Comparative transcriptome reveals the effect of IFITM1 on differential resistance to duck hepatitis A virus genotype 3 in Pekin ducks.比较转录组揭示 IFITM1 对北京鸭抗鸭甲型肝炎病毒 3 型差异抗性的影响。
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The Hippo pathway mediates Semaphorin signaling.河马通路介导信号素信号传导。
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Genomewide CRISPR knockout screen identified PLAC8 as an essential factor for SADS-CoVs infection.全基因组 CRISPR 敲除筛选发现 PLAC8 是 SARS-CoV-2 等相关冠状病毒感染的必需因素。
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