Hao Cui-Lan, Arken Kadirden, Kadir Munira, Zhang Wen-Run, Rong Meng-Jie, Wei Nian-Wen, Liu Yan-Jun, Yue Cheng
College of Veterinary Medicine, Xinjiang Agricultural University, Urumqi, 830052, Xinjiang, China.
Parasit Vectors. 2022 Apr 27;15(1):149. doi: 10.1186/s13071-022-05275-x.
Diplozoidae are monogenean (Monogenea: Polyopisthocotylea) fish parasites characterised by a unique life history: two larvae permanently fuse into an X-shaped "Siamese" organism. Taxonomy and phylogeny of Diplozoidae and Polyopisthocotylea remain unresolved due to the unavailability of molecular markers with sufficiently high resolution. Mitogenomes may be a suitable candidate, but there are currently only 12 available for the Polyopisthocotylea (three for Diplozoidae). The only available study of diplozoid mitogenomes found unique base composition patterns and elevated evolution rates in comparison with other Monogenean mitogenomes.
To further explore their evolution and generate molecular data for evolutionary studies, we sequenced the complete mitogenomes of two Diplozoidae species, Paradiplozoon homoion and Paradiplozoon yarkandense, and conducted a number of comparative mitogenomic analyses with other polyopisthocotyleans.
We found further evidence that mitogenomes of Diplozoidae evolve at a unique, elevated rate, which was reflected in their exceptionally long branches, large sizes, unique base composition, skews, and very low gene sequence similarity levels between the two newly sequenced species. They also exhibited remarkably large overlaps between some genes. Phylogenetic analysis of Polyopisthocotylea resolved all major taxa as monophyletic, and Mazocraeidea was split into two major clades: (Diplozoidae) + (all four remaining families: Diclidophoridae, Chauhaneidae, Mazocraeidae and Microcotylidae). It also provided further confirmation that the genus Paradiplozoon is paraphyletic and requires a taxonomic revision, so the two species may have to be renamed Indodiplozoon homoion and Diplozoon yarkandense comb. nov.
Although our findings indicate that mitogenomes may be a promising tool for resolving the phylogeny of Polyopisthocotylea, elevated evolutionary rates of Diplozoidae may cause phylogenetic artefacts, so future studies should pay caution to this problem. Furthermore, as the reason for their elevated evolution remains unknown, Diplozoidae are a remarkably interesting lineage for other types of evolutionary mitogenomic studies.
双身虫科是单殖吸虫(单殖亚纲:多后盘目)鱼类寄生虫,其独特的生活史特征为:两个幼虫永久融合形成一个X形的“连体”生物体。由于缺乏具有足够高分辨率的分子标记,双身虫科和多后盘目的分类学及系统发育仍未得到解决。线粒体基因组可能是一个合适的候选对象,但目前多后盘目仅有12个线粒体基因组可用(双身虫科有3个)。唯一一项关于双身虫线粒体基因组的研究发现,与其他单殖吸虫线粒体基因组相比,其具有独特的碱基组成模式和较高的进化速率。
为了进一步探索它们的进化并生成用于进化研究的分子数据,我们对两种双身虫科物种,即同形副双身虫和叶尔羌副双身虫的完整线粒体基因组进行了测序,并与其他多后盘目物种进行了一系列比较线粒体基因组分析。
我们进一步发现证据表明,双身虫科的线粒体基因组以独特的、较高的速率进化,这体现在它们异常长的分支、较大的大小、独特的碱基组成、偏斜以及两个新测序物种之间极低的基因序列相似性水平上。它们在一些基因之间还表现出显著大的重叠。多后盘目的系统发育分析将所有主要类群解析为单系群,马佐吸虫亚目被分为两个主要分支:(双身虫科)+(其余四个科:双盘吸虫科、乔氏吸虫科、马佐吸虫科和微杯吸虫科)。这也进一步证实副双身虫属是并系的,需要进行分类修订,因此这两个物种可能不得不重新命名为印度同形双身虫和新组合的叶尔羌双身虫。
尽管我们的研究结果表明线粒体基因组可能是解决多后盘目系统发育的一个有前途的工具,但双身虫科较高的进化速率可能会导致系统发育假象,因此未来的研究应谨慎对待这个问题。此外,由于它们进化速率升高的原因仍然未知,双身虫科是其他类型进化线粒体基因组研究中一个非常有趣的谱系。