Institute for Integrative Systems Biology I2SysBio (University of Valencia - CSIC), Calle Catedrático Agustín Escardino Benlloch 9, 46980, Paterna, Spain.
Department of Biological and Environmental Sciences, University of Gothenburg, Carl Skottsbergs gata 22B, 41319, Gothenburg, Sweden.
NPJ Biofilms Microbiomes. 2022 Apr 28;8(1):32. doi: 10.1038/s41522-022-00299-8.
Bioprospecting of microorganisms suitable for bioremediation of fuel or oil spills is often carried out in contaminated environments such as gas stations or polluted coastal areas. Using next-generation sequencing (NGS) we analyzed the microbiota thriving below the lids of the fuel deposits of diesel and gasoline cars. The microbiome colonizing the tank lids differed from the diversity found in other hydrocarbon-polluted environments, with Proteobacteria being the dominant phylum and without clear differences between gasoline or diesel-fueled vehicles. We observed differential growth when samples were inoculated in cultures with gasoline or diesel as the main carbon source, as well as an increase in the relative abundance of the genus Pseudomonas in diesel. A collection of culturable strains was established, mostly Pseudomonas, Stenotrophomonas, Staphylococcus, and Bacillus genera. Strains belonging to Bacillus, Pseudomonas, Achromobacter, and Isoptericola genera showed a clear diesel degradation pattern when analyzed by GC-MS, suggesting their potential use for bioremediation and a possible new species of Isoptericola was further characterized as hydrocarbon degrader.
生物勘探适用于生物修复燃料或溢油的微生物通常在污染环境中进行,例如加油站或污染沿海地区。使用下一代测序(NGS),我们分析了在柴油和汽油车燃料沉积物盖子下茁壮成长的微生物组。在罐盖中定殖的微生物组与在其他碳氢化合物污染环境中发现的多样性不同,变形菌门是主要的门,并且在汽油或柴油燃料车辆之间没有明显差异。当用汽油或柴油作为主要碳源接种培养物时,我们观察到了差异生长,并且在柴油中假单胞菌属的相对丰度增加。建立了可培养菌株的集合,主要是假单胞菌属、寡养单胞菌属、葡萄球菌属和芽孢杆菌属。属于芽孢杆菌属、假单胞菌属、无色杆菌属和异翅目菌属的菌株在 GC-MS 分析时表现出明显的柴油降解模式,表明它们可能用于生物修复,并且进一步将异翅目菌属的一个新种鉴定为烃类降解菌。