Chen Xu, Chen Er-Qiang, Yang Shuang
Beijing National Laboratory for Molecular Sciences, Key Laboratory of Polymer Chemistry and Physics of Ministry of Education, Center for Soft Mater Science and Engineering, College of Chemistry and Molecular Engineering, Peking University Beijing 100871 China
RSC Adv. 2020 Jan 9;10(4):1890-1900. doi: 10.1039/c9ra09694a. eCollection 2020 Jan 8.
In this paper we study the electrostatic attraction between two parallel rodlike DNA polyelectrolytes induced by neutralizing multivalent counterions at the zero temperature limit. The counterions crystallize on the charged surfaces of DNA so that we can handle the system by using the Wigner crystal lattice model. We derived the 3D ground state configuration of counterions with minimized energy by use of the gradient descent method, and calculated the interaction between two DNA cylinders with divalent or trivalent counterions when they approach. The results show that the complex ground state configuration of counterions plays a key role in determining the caused attraction. The counterions form three-dimensional Wigner crystals on each cylinder at large separation. When the cylinders are brought together, some counterion lines will move towards the inner region and lead to strong attraction. The calculated interaction from our model is in good agreement with the simulation result, however, the single particle approximation considerably overestimates the attraction.
在本文中,我们研究了在零温度极限下,通过中和多价抗衡离子诱导的两条平行棒状DNA聚电解质之间的静电吸引力。抗衡离子在DNA的带电表面结晶,因此我们可以使用维格纳晶格模型来处理该系统。我们通过使用梯度下降法推导了能量最小化的抗衡离子的三维基态构型,并计算了带有二价或三价抗衡离子的两个DNA圆柱体靠近时的相互作用。结果表明,抗衡离子的复杂基态构型在确定所引起的吸引力方面起着关键作用。在较大间距时,抗衡离子在每个圆柱体上形成三维维格纳晶体。当圆柱体靠近时,一些抗衡离子线会向内部区域移动并导致强烈的吸引力。我们模型计算的相互作用与模拟结果吻合良好,然而,单粒子近似大大高估了吸引力。