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基于曲率的不对称弯曲等离子体膜模型中八种脂质类型的排序。

Curvature-based sorting of eight lipid types in asymmetric buckled plasma membrane models.

机构信息

Centre for Molecular Simulation and Department of Biological Sciences, University of Calgary, Calgary, Canada.

Centre for Molecular Simulation and Department of Biological Sciences, University of Calgary, Calgary, Canada.

出版信息

Biophys J. 2022 Jun 7;121(11):2060-2068. doi: 10.1016/j.bpj.2022.05.002. Epub 2022 May 5.

DOI:10.1016/j.bpj.2022.05.002
PMID:35524412
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9247473/
Abstract

Curvature is a fundamental property of biological membranes and has essential roles in cellular function. Bending of membranes can be induced by their lipid and protein compositions, as well as peripheral proteins, such as those that make up the cytoskeleton. An important aspect of membrane function is the grouping of lipid species into microdomains, or rafts, which serve as platforms for specific biochemical processes. The fluid mosaic model of membranes has evolved to recognize the importance of curvature and leaflet asymmetry, and there are efforts toward evaluating their functional roles. This work investigates the effect of curvature on the sorting of lipids in buckled asymmetric bilayers containing eight lipid types, approximating an average mammalian plasma membrane, through coarse-grained (CG) molecular dynamics (MD) simulations with the Martini force field. The simulations reveal that 1) leaflet compositional asymmetry can induce curvature asymmetry, 2) lipids are sorted by curvature to different extents, and 3) curvature-based partitioning trends show moderate to strong correlations with lipid molecular volumes and head to tail bead ratios, respectively. The findings provide unique insights into the role of curvature in membrane organization, and the curvature-based sorting trends should be useful references for later investigations and potentially interpreting the functional roles of specific lipids.

摘要

曲率是生物膜的基本性质,对细胞功能具有重要作用。膜的弯曲可以由其脂质和蛋白质组成以及周围蛋白(如构成细胞骨架的蛋白)诱导。膜功能的一个重要方面是将脂质种类分组为微域或筏,这些微域或筏作为特定生化过程的平台。膜的流动镶嵌模型已经发展到认识到曲率和双层不对称的重要性,并正在努力评估它们的功能作用。这项工作通过使用粗粒度(CG)分子动力学(MD)模拟和 Martini 力场,研究了曲率对含有八种脂质类型的弯曲不对称双层中脂质排序的影响,这些脂质类型近似于平均哺乳动物质膜。模拟结果表明:1)双层组成不对称性可以诱导曲率不对称性;2)脂质根据曲率进行不同程度的排序;3)基于曲率的分区趋势与脂质分子体积和头部到尾部珠比率分别显示出中等至强的相关性。这些发现为曲率在膜组织中的作用提供了独特的见解,基于曲率的排序趋势应该对以后的研究和潜在的解释特定脂质的功能作用有用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/420f/9247473/f3d6b7777c43/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/420f/9247473/5587b104a796/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/420f/9247473/aa5e035a87c4/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/420f/9247473/901a365f0a4b/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/420f/9247473/e77b2894a430/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/420f/9247473/4e5aac6b3571/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/420f/9247473/f3d6b7777c43/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/420f/9247473/5587b104a796/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/420f/9247473/aa5e035a87c4/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/420f/9247473/901a365f0a4b/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/420f/9247473/e77b2894a430/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/420f/9247473/4e5aac6b3571/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/420f/9247473/f3d6b7777c43/gr6.jpg

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本文引用的文献

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