忍冬科七子花属植物的叶绿体全基因组及其系统发育意义
Complete chloroplast genome of Batalin (Caprifoliaceae) and its phylogenetic implications.
作者信息
Chen Chao, Qu Da-Hao, Shan Fang-Quan, Jin Ze-Xin, Sun Zhong-Shuai
机构信息
Zhejiang Provincial Key Laboratory of Plant Evolutionary Ecology and Conservation, Taizhou University, Taizhou, China.
College of Life Sciences, Shanghai Normal University, Shanghai, China.
出版信息
Mitochondrial DNA B Resour. 2022 Apr 29;7(5):732-734. doi: 10.1080/23802359.2022.2068979. eCollection 2022.
is a prostrate or creeping, evergreen species endemic to southwest China. Here, we reported the complete chloroplast (cp) genome of (GenBank accession number: OK393707). The cp genome was 154,731 bp long, with a large single-copy region (LSC) of 88,619 bp and a small single-copy region (SSC) of 18,642 bp separated by a pair of inverted repeats (IRs) of 23,735 bp. It encodes 130 genes, including 85 protein-coding genes, 37 tRNA genes, and 8 ribosomal RNA genes. We also reconstructed the phylogeny of using the maximum-likelihood (ML) method, including our data and previously reported cp genomes of related taxa. The phylogenetic analysis showed that is a sister to the remaining Nintooa clade with strong bootstrap support.
是一种匍匐或蔓生的常绿物种，为中国西南地区特有。在此，我们报道了（GenBank登录号：OK393707）的完整叶绿体（cp）基因组。该cp基因组长度为154,731 bp，有一个88,619 bp的大单拷贝区域（LSC）和一个18,642 bp的小单拷贝区域（SSC），由一对23,735 bp的反向重复序列（IR）隔开。它编码130个基因，包括85个蛋白质编码基因、37个tRNA基因和8个核糖体RNA基因。我们还使用最大似然法（ML）重建了的系统发育，包括我们的数据和先前报道的相关分类群的cp基因组。系统发育分析表明，在强烈的自展支持下，是其余Nintooa分支的姐妹群。
Zotero 插件