蔷薇科一种原产于北美西部的植物的完整叶绿体基因组。
Complete chloroplast genome of (Rosaceae), a species native to western North America.
作者信息
Li Yue-Ling, Reed James, Xu Yu-Qian, Qu Da-Hao, Sun Zhong-Shuai
机构信息
Zhejiang Provincial Key Laboratory of Plant Evolutionary Ecology and Conservation, Taizhou University, Taizhou, China.
California Botanic Garden, Claremont, CA, USA.
出版信息
Mitochondrial DNA B Resour. 2021 Feb 9;6(2):480-482. doi: 10.1080/23802359.2021.1872439.
is a wild species of native to western North America. Here, we reported the complete chloroplast (cp) genome of (GenBank accession number: MW160273). The cp genome was 157,986 bp long, with a large single-copy (LSC) region of 86,068 bp and a small single-copy (SSC) region of 19,166 bp separated by a pair of inverted repeats (IRs) of 26,376 bp. It encodes 129 genes, including 84 protein-coding genes, 37 tRNA genes, and eight ribosomal RNA genes. We also reconstructed the phylogeny of using maximum-likelihood (ML) method, including our data and previously reported cp genomes of related taxa. The phylogenetic analysis confirmed the sister group relationship between and the remaining subg. .
是一种原产于北美西部的野生物种。在此，我们报道了（GenBank登录号：MW160273）的完整叶绿体（cp）基因组。该cp基因组长度为157,986 bp，有一个86,068 bp的大单拷贝（LSC）区域和一个19,166 bp的小单拷贝（SSC）区域，由一对26,376 bp的反向重复序列（IR）隔开。它编码129个基因，包括84个蛋白质编码基因、37个tRNA基因和8个核糖体RNA基因。我们还使用最大似然（ML）方法重建了的系统发育，包括我们的数据和先前报道的相关分类群的cp基因组。系统发育分析证实了与其余亚组之间的姐妹群关系。
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