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蔷薇科一种原产于北美西部的植物的完整叶绿体基因组。

Complete chloroplast genome of (Rosaceae), a species native to western North America.

作者信息

Li Yue-Ling, Reed James, Xu Yu-Qian, Qu Da-Hao, Sun Zhong-Shuai

机构信息

Zhejiang Provincial Key Laboratory of Plant Evolutionary Ecology and Conservation, Taizhou University, Taizhou, China.

California Botanic Garden, Claremont, CA, USA.

出版信息

Mitochondrial DNA B Resour. 2021 Feb 9;6(2):480-482. doi: 10.1080/23802359.2021.1872439.

Abstract

is a wild species of native to western North America. Here, we reported the complete chloroplast (cp) genome of (GenBank accession number: MW160273). The cp genome was 157,986 bp long, with a large single-copy (LSC) region of 86,068 bp and a small single-copy (SSC) region of 19,166 bp separated by a pair of inverted repeats (IRs) of 26,376 bp. It encodes 129 genes, including 84 protein-coding genes, 37 tRNA genes, and eight ribosomal RNA genes. We also reconstructed the phylogeny of using maximum-likelihood (ML) method, including our data and previously reported cp genomes of related taxa. The phylogenetic analysis confirmed the sister group relationship between and the remaining subg. .

摘要

是一种原产于北美西部的野生物种。在此,我们报道了(GenBank登录号:MW160273)的完整叶绿体(cp)基因组。该cp基因组长度为157,986 bp,有一个86,068 bp的大单拷贝(LSC)区域和一个19,166 bp的小单拷贝(SSC)区域,由一对26,376 bp的反向重复序列(IR)隔开。它编码129个基因,包括84个蛋白质编码基因、37个tRNA基因和8个核糖体RNA基因。我们还使用最大似然(ML)方法重建了的系统发育,包括我们的数据和先前报道的相关分类群的cp基因组。系统发育分析证实了与其余亚组之间的姐妹群关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51f9/7889079/4d86558b9fff/TMDN_A_1872439_F0001_B.jpg

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