喜马拉雅地区特有的野生开花樱桃——（蔷薇科）的完整叶绿体基因组。
Complete chloroplast genome of (Rosaceae), a wild flowering cherry endemic to the Himalayan region.
作者信息
Li Yue-Ling, Clarke Barry, Li Jian-Hui, Sun Zhong-Shuai
机构信息
Zhejiang Provincial Key Laboratory of Plant Evolutionary Ecology and Conservation, Taizhou University, Taizhou, Zhejiang, China.
The Sir Harold Hillier Gardens, Romsey, United Kingdom.
出版信息
Mitochondrial DNA B Resour. 2019 Dec 13;5(1):160-161. doi: 10.1080/23802359.2019.1698363.
is a species of Prunus native to the Himalayan region. We determined the first complete chloroplast genome of using a genome skimming approach. The cp genome was 157,723 bp long, with a large single-copy region (LSC) of 85,860 bp and a small single-copy region (SSC) of 19,081 bp separated by a pair of inverted repeats (IRs) of 26,391 bp each. It encodes 129 genes, including 84 protein-coding genes, 37 tRNA genes, and 8 ribosomal RNA genes. We also reconstructed the phylogeny of using maximum-likelihood (ML) method, including our data and previously reported cp genomes of related taxa. The phylogenetic analysis indicated that is closely related to .
是一种原产于喜马拉雅地区的李属物种。我们使用基因组浅层测序方法确定了该物种的首个完整叶绿体基因组。叶绿体基因组长度为157,723 bp，有一个85,860 bp的大单拷贝区域（LSC）和一个19,081 bp的小单拷贝区域（SSC），它们被两个各为26,391 bp的反向重复序列（IR）隔开。它编码129个基因，包括84个蛋白质编码基因、37个tRNA基因和8个核糖体RNA基因。我们还使用最大似然法（ML）重建了该物种的系统发育，包括我们的数据以及先前报道的相关分类群的叶绿体基因组。系统发育分析表明该物种与 密切相关。
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