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二氢皱纹黄酮及其衍生物的分子模拟研究与筛选。 (你提供的原文似乎不完整,against后面缺少具体内容)

Molecular modeling studies and screening of dihydrorugosaflavonoid and its derivatives against .

作者信息

Puranik Ninad V, Srivastava Pratibha, Swami Sagar, Choudhari Amit, Sarkar Dhiman

机构信息

Bioprospecting Group, Agharkar Research Institute G. G. Agarkar Road Pune 411004 Maharashtra India

Savitribai Phule Pune University Pune-411007 India.

出版信息

RSC Adv. 2018 Mar 16;8(19):10634-10643. doi: 10.1039/c8ra00636a. eCollection 2018 Mar 13.

Abstract

Novel drug regimens against tuberculosis (TB) are urgently needed and may be developed by targeting essential enzymes of Mtb that sustain the pathogenicity of tuberculosis. In the present investigation, series of compounds (5a-f and 6a-f) based on a naturally occurring rugosaflavonoid moiety were evaluated by molecular modeling studies against β-ketoacyl-ACP reductase (MabA) (PDB ID: IUZN) and pantothenate kinase (PanK) (PDB ID: 3AF3). Compounds 5a, 5c, 5d, and 6c, which had docking scores of -8.29, -8.36, -8.17 and -7.39 kcal mol, respectively, displayed interactions with MabA that were better than those of isoniazid (-6.81 kcal mol). Similarly, compounds 5a, 5c, 5d, and 6c, which had docking scores of -7.55, -7.64, -7.40 and -6.7 kcal mol, respectively, displayed interactions with PanK that were comparable to those of isoniazid (-7.64 kcal mol). Because of their docking scores, these compounds were screened against H37Ra (Mtb) using an XRMA protocol. Among the screened compounds, the dihydrorugosaflavonoid derivatives 5a, 5c, and 5d had IC values of 12.93, 8.43 and 11.3 μg mL, respectively, and exhibited better inhibitory activity than the parent rugosaflavonoid derivatives. The rugosaflavonoid derivative 6c had an IC value of 17.57 μg mL. The synthesized compounds also displayed inhibitory activity against the Gram-positive bacteria and . The present study will be helpful for the further development of these molecules into antitubercular lead candidates.

摘要

迫切需要针对结核病(TB)的新型药物方案,并且可以通过靶向维持结核病致病性的结核分枝杆菌(Mtb)的必需酶来开发。在本研究中,通过分子模拟研究,针对β-酮酰基-ACP还原酶(MabA)(PDB ID:IUZN)和泛酸激酶(PanK)(PDB ID:3AF3)评估了一系列基于天然存在的皱纹菌素类黄酮部分的化合物(5a-f和6a-f)。对接分数分别为-8.29、-8.36、-8.17和-7.39 kcal/mol的化合物5a、5c、5d和6c与MabA的相互作用优于异烟肼(-6.81 kcal/mol)。同样,对接分数分别为-7.55、-7.64、-7.40和-6.7 kcal/mol的化合物5a、5c、5d和6c与PanK的相互作用与异烟肼(-7.64 kcal/mol)相当。由于它们的对接分数,使用XRMA方案针对H37Ra(Mtb)对这些化合物进行了筛选。在筛选出的化合物中,二氢皱纹菌素类黄酮衍生物5a、5c和5d的IC值分别为12.93、8.43和11.3 μg/mL,并且表现出比母体皱纹菌素类黄酮衍生物更好的抑制活性。皱纹菌素类黄酮衍生物6c的IC值为17.57 μg/mL。合成的化合物还对革兰氏阳性菌和……显示出抑制活性。本研究将有助于将这些分子进一步开发成抗结核先导候选物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6eb3/9078922/df9b3a490886/c8ra00636a-s1.jpg

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