Carnerero Jose M, Masuoka Shinsuke, Baba Hikari, Yoshikawa Yuko, Prado-Gotor Rafael, Yoshikawa Kenichi
Department of Physical Chemistry, Faculty of Chemistry, Universidad de Sevilla c/Profesor García González, 1 41012 Seville Spain
Faculty of Life and Medical Sciences, Doshisha University Kyotanabe 610-0394 Japan
RSC Adv. 2018 Jul 25;8(47):26571-26579. doi: 10.1039/c8ra05088k. eCollection 2018 Jul 24.
We decorated a single giant DNA (1.66 × 10 base pairs) with gold nanoparticles through the simple procedure of mild warming, without denaturation of the DNA molecule. Single-molecule observation with fluorescence microscopy revealed that individual decorated DNA molecules stay in the bulk solution by avoiding aggregation and precipitation, and exhibit translational and conformational fluctuation, , Brownian motion. An analysis of the intra-chain fluctuation of single DNA molecules revealed that the apparent spring constant and damping coefficient of a DNA chain increased by 13- and 5-fold, respectively, upon decoration with gold nanoparticles. Observation by transmission electron microscopy revealed that gold nanoparticles were stably attached to the DNA skeleton. UV-visible measurements revealed the absence of any detectable change in surface plasmon resonance, suggesting that the gold nanoparticles assemble without the formation of a densely packed aggregate. CD measurements showed that the secondary structure of decorated DNA is still essentially the B-form.
我们通过温和加热的简单步骤,在不使DNA分子变性的情况下,用金纳米颗粒修饰了单个巨大的DNA(1.66×10个碱基对)。荧光显微镜的单分子观察表明,单个修饰的DNA分子通过避免聚集和沉淀而留在本体溶液中,并表现出平移和构象波动,即布朗运动。对单个DNA分子链内波动的分析表明,在用金纳米颗粒修饰后,DNA链的表观弹簧常数和阻尼系数分别增加了13倍和5倍。透射电子显微镜观察表明,金纳米颗粒稳定地附着在DNA骨架上。紫外可见测量表明表面等离子体共振没有任何可检测到的变化,这表明金纳米颗粒在组装时没有形成紧密堆积的聚集体。圆二色性测量表明,修饰后DNA的二级结构基本上仍为B型。