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Estimation and construction of confidence intervals for biomarker cutoff-points under the shortest Euclidean distance from the ROC surface to the perfection corner.基于ROC 曲面到完美角落的最短欧几里得距离估计和构建生物标志物截断点的置信区间。
Stat Med. 2021 Sep 10;40(20):4522-4539. doi: 10.1002/sim.9077. Epub 2021 Jun 3.
2
AGA Clinical Practice Update on Pancreas Cancer Screening in High-Risk Individuals: Expert Review.美国胃肠病学会关于高危个体胰腺癌筛查的临床实践更新:专家综述
Gastroenterology. 2020 Jul;159(1):358-362. doi: 10.1053/j.gastro.2020.03.088. Epub 2020 May 19.
3
A comprehensive and comparative review of optimal cut-points selection methods for diseases with multiple ordinal stages.多种有序分期疾病最佳切点选择方法的综合比较评价
J Biopharm Stat. 2020;30(1):46-68. doi: 10.1080/10543406.2019.1632876. Epub 2019 Jun 28.
4
Bayesian nonparametric inference for the three-class Youden index and its associated optimal cutoff points.针对三类尤登指数及其相关最优截断点的贝叶斯非参数推断。
Stat Methods Med Res. 2018 Mar;27(3):689-700. doi: 10.1177/0962280217742538. Epub 2017 Dec 15.
5
Confidence intervals for differences between volumes under receiver operating characteristic surfaces (VUS) and generalized Youden indices (GYIs).受试者工作特征曲线下体积(VUS)与广义约登指数(GYI)差异的置信区间。
Stat Methods Med Res. 2018 Mar;27(3):675-688. doi: 10.1177/0962280217740787. Epub 2017 Dec 12.
6
Sequential Validation of Blood-Based Protein Biomarker Candidates for Early-Stage Pancreatic Cancer.早期胰腺癌血液中蛋白质生物标志物候选物的序贯验证
J Natl Cancer Inst. 2017 Apr 1;109(4). doi: 10.1093/jnci/djw266.
7
Cancer Statistics, 2017.《2017 年癌症统计》
CA Cancer J Clin. 2017 Jan;67(1):7-30. doi: 10.3322/caac.21387. Epub 2017 Jan 5.
8
CA 19-9: Biochemical and Clinical Aspects.CA 19-9:生化与临床方面
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9
Early detection of sporadic pancreatic cancer: summative review.散发性胰腺癌的早期检测:综述
Pancreas. 2015 Jul;44(5):693-712. doi: 10.1097/MPA.0000000000000368.
10
Construction of joint confidence regions for the optimal true class fractions of Receiver Operating Characteristic (ROC) surfaces and manifolds.用于接收者操作特征(ROC)曲面和流形的最优真实类别比例的联合置信区域的构建。
Stat Methods Med Res. 2017 Jun;26(3):1429-1442. doi: 10.1177/0962280215581694. Epub 2015 Apr 24.

在诊断困境中考虑错误分类成本的最佳生物标志物切点,并应用于胰腺癌。

On optimal biomarker cutoffs accounting for misclassification costs in diagnostic trilemmas with applications to pancreatic cancer.

机构信息

Department of Biostatistics and Data Science, University of Kansas Medical Center, Kansas City, Kansas, USA.

Department of Statistics and Actuarial-Financial Mathematics, University of the Aegean, Samos, Greece.

出版信息

Stat Med. 2022 Aug 15;41(18):3527-3546. doi: 10.1002/sim.9432. Epub 2022 May 11.

DOI:10.1002/sim.9432
PMID:35543227
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9707502/
Abstract

Pancreatic ductal adenocarcinoma (PDAC) is the most deadly cancer and currently there is strong clinical interest in novel biomarkers that contribute to its early detection. Assessing appropriately the accuracy of such biomarkers is a crucial issue and often one needs to take into account that many assays include biospecimens of individuals coming from three groups: healthy, chronic pancreatitis, and PDAC. The ROC surface is an appropriate tool for assessing the overall accuracy of a marker employed under such trichotomous settings. A decision/classification rule is often based on the so-called Youden index and its three-dimensional generalization. However, both the clinical and the statistical literature have not paid the necessary attention to the underlying false classification (FC) rates that are of equal or even greater importance. In this article we provide a framework to make inferences around all classification rates as well as comparisons. We explore the trinormal model, flexible models based on power transformations, and robust non-parametric alternatives. We provide a full framework for the construction of confidence intervals, regions, and spaces for joint inferences or for clinically meaningful points of interest. We further discuss the implications of costs related to different FCs. We evaluate our approaches through extensive simulations and illustrate them using data from a recent PDAC study conducted at the MD Anderson Cancer Center.

摘要

胰腺导管腺癌 (PDAC) 是最致命的癌症,目前临床上强烈关注有助于早期发现的新型生物标志物。评估此类生物标志物的准确性是一个关键问题,通常需要考虑到许多检测包括来自三组个体的生物样本:健康人、慢性胰腺炎和 PDAC。ROC 表面是评估在这种三分设置下使用的标记物的整体准确性的合适工具。决策/分类规则通常基于所谓的 Youden 指数及其三维推广。然而,临床和统计文献都没有对同样重要甚至更重要的潜在错误分类 (FC) 率给予必要的关注。在本文中,我们提供了一个围绕所有分类率进行推断和比较的框架。我们探索了三正态模型、基于幂变换的灵活模型和稳健的非参数替代方法。我们为联合推断或临床有意义的感兴趣点构建置信区间、区域和空间提供了完整的框架。我们进一步讨论了与不同 FC 相关的成本的影响。我们通过广泛的模拟评估我们的方法,并使用 MD 安德森癌症中心最近进行的 PDAC 研究的数据进行说明。