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利用反向疫苗学方法设计一种针对埃博拉病毒的新型多表位疫苗。

Designing a novel multi‑epitope vaccine against Ebola virus using reverse vaccinology approach.

机构信息

Department of Tissue Engineering, School of Medicine, Shahroud University of Medical Sciences, Shahroud, Iran.

Medical Plants Research Center, Basic Health Sciences Institute, Shahrekord University of Medical Sciences, Shahrekord, Iran.

出版信息

Sci Rep. 2022 May 11;12(1):7757. doi: 10.1038/s41598-022-11851-z.

Abstract

Ebola virus (EBOV) is a dangerous zoonotic infectious disease. To date, more than 25 EBOV outbreaks have been documented, the majority of which have occurred in Central Africa. The rVSVG-ZEBOV-GP vaccine (ERVEBO), a live attenuated vaccine, has been approved by the US Food and Drug Administration (FDA) to combat EBOV. Because of the several drawbacks of live attenuated vaccines, multi-epitope vaccines probably appear to be safer than live attenuated vaccines. In this work, we employed immunoinformatics tools to design a multi-epitope vaccine against EBOV. We collected sequences of VP35, VP24, VP30, VP40, GP, and NP proteins from the NCBI database. T-cell and linear B-cell epitopes from target proteins were identified and tested for antigenicity, toxicity, allergenicity, and conservancy. The selected epitopes were then linked together in the vaccine's primary structure using appropriate linkers, and the 50S ribosomal L7/L12 (Locus RL7 MYCTU) sequence was added as an adjuvant to the vaccine construct's N-terminal. The physicochemical, antigenicity, and allergenicity parameters of the vaccine were all found to be satisfactory. The 3D model of the vaccine was predicted, refined, and validated. The vaccine construct had a stable and strong interaction with toll-like receptor 4 (TLR4) based on molecular docking and molecular dynamic simulation (MD) analysis. The results of codon optimization and in silico cloning revealed that the proposed vaccine was highly expressed in Escherichia coli (E. coli). The findings of this study are promising; however, experimental validations should be carried out to confirm these findings.

摘要

埃博拉病毒(EBOV)是一种危险的人畜共患传染病。迄今为止,已有超过 25 次 EBOV 爆发记录,其中大多数发生在中非。rVSVG-ZEBOV-GP 疫苗(ERVEBO)是一种减毒活疫苗,已被美国食品和药物管理局(FDA)批准用于对抗 EBOV。由于减毒活疫苗存在一些缺点,多表位疫苗可能比减毒活疫苗更安全。在这项工作中,我们使用免疫信息学工具设计了一种针对 EBOV 的多表位疫苗。我们从 NCBI 数据库中收集了 VP35、VP24、VP30、VP40、GP 和 NP 蛋白的序列。从目标蛋白中鉴定了 T 细胞和线性 B 细胞表位,并对其抗原性、毒性、变应原性和保守性进行了测试。选择的表位然后使用合适的接头连接在一起,50S 核糖体 L7/L12(Locus RL7 MYCTU)序列被添加到疫苗构建体的 N 端作为佐剂。疫苗的物理化学、抗原性和变应原性参数均令人满意。预测、优化和验证了疫苗的 3D 模型。基于分子对接和分子动力学模拟(MD)分析,疫苗构建体与 Toll 样受体 4(TLR4)具有稳定而强大的相互作用。密码子优化和计算机克隆的结果表明,所提出的疫苗在大肠杆菌(E. coli)中高度表达。这项研究的结果很有前途;然而,应该进行实验验证来确认这些发现。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa6e/9095726/a1384eb83fab/41598_2022_11851_Fig1_HTML.jpg

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