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小鼠乳酸脱氢酶-A加工假基因中自发突变的分子性质

Molecular nature of spontaneous mutations in mouse lactate dehydrogenase-A processed pseudogenes.

作者信息

Fukasawa K M, Tanimura M, Sakai I, Sharief F S, Chung F Z, Li S S

出版信息

Genetics. 1987 Jan;115(1):177-84. doi: 10.1093/genetics/115.1.177.

DOI:10.1093/genetics/115.1.177
PMID:3557110
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1203054/
Abstract

The presence of at least ten mouse LDH-A pseudogenes was demonstrated in the genomic blot analysis, and four different processed pseudogenes have thus far been isolated and characterized. In this report, the nucleotide sequences to two different mouse lactate dehydrogenase-A processed pseudogenes, M11 and M14, were determined and compared with the protein-coding sequences of the mouse and rat LDH-A functional genes. In the pseudogene M11, the sequence of 64 nucleotides from codon no. 257 to 278 was tandemly duplicated. In the pseudogene M14, the sequence of 22 nucleotides from codon no. 68 to 75 was replaced by an inserted repetitive sequence of 242 nucleotides homologous to a mouse truncated R element. The pattern of nucleotide substitutions accumulated in mouse LDH-A pseudogenes M11 and M14, as well as that of pseudogene M10 identified previously, was analyzed, and the substitution frequencies of the C or G at the CG dinucleotide were found to be high.

摘要

基因组印迹分析证明至少存在十个小鼠乳酸脱氢酶A假基因,目前已分离并鉴定出四种不同的加工假基因。在本报告中,测定了两种不同的小鼠乳酸脱氢酶A加工假基因M11和M14的核苷酸序列,并与小鼠和大鼠乳酸脱氢酶A功能基因的蛋白质编码序列进行了比较。在假基因M11中,从第257号密码子到278号密码子的64个核苷酸序列串联重复。在假基因M14中,从第68号密码子到75号密码子的22个核苷酸序列被一个与小鼠截短的R元件同源的242个核苷酸的插入重复序列所取代。分析了在小鼠乳酸脱氢酶A假基因M11和M14以及先前鉴定的假基因M10中积累的核苷酸取代模式,发现CG二核苷酸处的C或G取代频率很高。

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1
Molecular nature of spontaneous mutations in mouse lactate dehydrogenase-A processed pseudogenes.小鼠乳酸脱氢酶-A加工假基因中自发突变的分子性质
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The cDNA and protein sequences of mouse lactate dehydrogenase B. Molecular evolution of vertebrate lactate dehydrogenase genes A (muscle), B (heart) and C (testis).小鼠乳酸脱氢酶B的cDNA和蛋白质序列。脊椎动物乳酸脱氢酶基因A(肌肉)、B(心脏)和C(睾丸)的分子进化。
Eur J Biochem. 1990 Apr 30;189(2):215-20. doi: 10.1111/j.1432-1033.1990.tb15479.x.
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引用本文的文献

1
Molecular, genetic and biochemical characterization of lactate dehydrogenase-A enzyme activity mutations in Mus musculus.小家鼠中乳酸脱氢酶 - A 酶活性突变的分子、遗传和生化特征
Mamm Genome. 1998 Feb;9(2):144-9. doi: 10.1007/s003359900705.
2
Concerted evolution in the GAPDH family of retrotransposed pseudogenes.逆转座假基因GAPDH家族中的协同进化。
Mamm Genome. 1993 Dec;4(12):695-703. doi: 10.1007/BF00357792.
3
The cDNA and protein sequences of human lactate dehydrogenase B.人乳酸脱氢酶B的cDNA和蛋白质序列。
Biochem J. 1987 Dec 15;248(3):933-6. doi: 10.1042/bj2480933.
4
Complete nucleotide sequence of the mouse lactate dehydrogenase-A functional gene: comparison of the exon-intron organization of dehydrogenase genes.小鼠乳酸脱氢酶-A功能基因的完整核苷酸序列:脱氢酶基因外显子-内含子结构的比较
Genetics. 1987 May;116(1):99-105. doi: 10.1093/genetics/116.1.99.
5
Deletions in processed pseudogenes accumulate faster in rodents than in humans.加工假基因中的缺失在啮齿动物中积累的速度比在人类中更快。
J Mol Evol. 1989 Apr;28(4):279-85. doi: 10.1007/BF02103423.

本文引用的文献

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Transposable Elements in Mendelian Populations. II. Distribution of Three COPIA-like Elements in a Natural Population of DROSOPHILA MELANOGASTER.孟德尔群体中的可转座元件。II. 在黑腹果蝇自然种群中三种 COPIA 样元件的分布。
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Nature. 1982 Nov 25;300(5890):330-5. doi: 10.1038/300330a0.
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Evolutionary relationships of vertebrate lactate dehydrogenase isozymes A4 (muscle), B4 (heart), and C4 (testis).脊椎动物乳酸脱氢酶同工酶A4(肌肉)、B4(心脏)和C4(睾丸)的进化关系。
J Biol Chem. 1983 Jun 10;258(11):7029-32.
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A glyceraldehyde-3-phosphate dehydrogenase pseudogene on the short arm of the human X chromosomes defines a multigene family.人类X染色体短臂上的一个3-磷酸甘油醛脱氢酶假基因定义了一个多基因家族。
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Nonrandomness of point mutation as reflected in nucleotide substitutions in pseudogenes and its evolutionary implications.假基因中核苷酸替换所反映的点突变的非随机性及其进化意义。
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