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免疫基因特征可预测肺腺癌的预后和免疫治疗反应。

An immune gene signature to predict prognosis and immunotherapeutic response in lung adenocarcinoma.

机构信息

School of Basic Medical Sciences, Fujian Medical University, Fuzhou, 350122, Fujian, China.

Department of Pathology, Fujian Provincial Maternity Hospital, Fuzhou, 350012, Fujian, China.

出版信息

Sci Rep. 2022 May 17;12(1):8230. doi: 10.1038/s41598-022-12301-6.

Abstract

Lung adenocarcinoma is one of the most common malignant tumors worldwide. The purpose of this study was to construct a stable immune gene signature for prediction of prognosis (IGSPP) and response to immune checkpoint inhibitors (ICIs) therapy in LUAD patients. Five genes were screened by weighted gene coexpression network analysis, Cox regression and LASSO regression analyses and were used to construct the IGSPP. The survival rate of the IGSPP low-risk group was higher than that of the IGSPP high-risk group. Multivariate Cox regression analysis showed that IGSPP could be used as an independent prognostic factor for the overall survival of LUAD patients. IGSPP genes were enriched in cell cycle pathways. IGSPP gene mutation rates were higher in the high-risk group. CD4 memory-activated T cells, M0 and M1 macrophages had higher infiltration abundance in the high-risk group, which was associated with poor overall survival. In contrast, the abundance of resting CD4 memory T cells, monocytes, resting dendritic cells and resting mast cells associated with a better prognosis was higher in the low-risk group. TIDE scores and the expressions of different immune checkpoints showed that patients in the high-risk IGSPP group benefited more from ICIs treatment. In short, an IGSPP of LUAD was constructed and characterized. It could be used to predict the prognosis and benefits of ICIs treatment in LUAD patients.

摘要

肺腺癌是全球最常见的恶性肿瘤之一。本研究旨在构建一个稳定的免疫基因特征预测肺腺癌患者预后(IGSPP)和免疫检查点抑制剂(ICIs)治疗反应的模型。通过加权基因共表达网络分析、Cox 回归和 LASSO 回归分析筛选出 5 个基因,用于构建 IGSPP。IGSPP 低风险组的生存率高于 IGSPP 高风险组。多因素 Cox 回归分析表明,IGSPP 可作为 LUAD 患者总生存期的独立预后因素。IGSPP 基因富集于细胞周期通路。IGSPP 基因在高风险组中的突变率更高。高风险组中 CD4 记忆激活 T 细胞、M0 和 M1 巨噬细胞的浸润丰度更高,与总生存期不良相关。相反,低风险组中与预后较好相关的静止 CD4 记忆 T 细胞、单核细胞、静止树突状细胞和静止肥大细胞的丰度更高。TIDE 评分和不同免疫检查点的表达表明,高风险 IGSPP 组的患者从 ICIs 治疗中获益更多。总之,构建并描述了 LUAD 的 IGSPP。它可用于预测 LUAD 患者的预后和 ICIs 治疗的获益。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eb79/9114138/978d5b032b29/41598_2022_12301_Fig1_HTML.jpg

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