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模式形成,从针叶树到意识:图灵理论与波动产生的秩序

Patterning, From Conifers to Consciousness: Turing's Theory and Order From Fluctuations.

作者信息

Lacalli Thurston C

机构信息

Biology Department, University of Victoria, Victoria, BC, Canada.

出版信息

Front Cell Dev Biol. 2022 May 3;10:871950. doi: 10.3389/fcell.2022.871950. eCollection 2022.

DOI:10.3389/fcell.2022.871950
PMID:35592249
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9111979/
Abstract

This is a brief account of Turing's ideas on biological pattern and the events that led to their wider acceptance by biologists as a valid way to investigate developmental pattern, and of the value of theory more generally in biology. Periodic patterns have played a key role in this process, especially 2D arrays of oriented stripes, which proved a disappointment in theoretical terms in the case of segmentation, but a boost to theory as applied to skin patterns in fish and model chemical reactions. The concept of "order from fluctuations" is a key component of Turing's theory, wherein pattern arises by selective amplification of spatial components concealed in the random disorder of molecular and/or cellular processes. For biological examples, a crucial point from an analytical standpoint is knowing the nature of the fluctuations, where the amplifier resides, and the timescale over which selective amplification occurs. The answer clarifies the difference between "inelegant" examples such as segmentation, which is perhaps better understood as a programmatic assembly process, and "elegant" ones expressible in equations like Turing's: that the fluctuations and selection process occur predominantly in evolutionary time for the former, but in real time for the latter, and likewise for error suppression, which for is historical, in being lodged firmly in past evolutionary events. The prospects for a further extension of Turing's ideas to the complexities of brain development and consciousness is discussed, where a case can be made that it could well be in neuroscience that his ideas find their most important application.

摘要

这是对图灵关于生物模式的观点以及那些使这些观点被生物学家更广泛地接受为研究发育模式的有效方法的事件的简要叙述,同时也是对理论在生物学中更普遍价值的简要叙述。周期性模式在这一过程中发挥了关键作用,尤其是定向条纹的二维阵列,在分段的情况下,从理论角度来看它令人失望,但在应用于鱼类皮肤模式和模型化学反应时却推动了理论发展。“源于波动的有序”概念是图灵理论的关键组成部分,其中模式是通过对隐藏在分子和/或细胞过程的随机无序中的空间成分进行选择性放大而产生的。对于生物学实例,从分析角度来看,一个关键点是要知道波动的性质、放大器所在位置以及选择性放大发生的时间尺度。答案阐明了像分段这样“不优雅”的例子(分段或许更好地被理解为一个程序性组装过程)与像图灵方程中那样可表达的“优雅”例子之间的区别:即对于前者,波动和选择过程主要发生在进化时间内,而对于后者则发生在实时过程中,同样对于错误抑制也是如此,对于前者错误抑制是历史性的,深深植根于过去的进化事件中。本文还讨论了将图灵的观点进一步扩展到大脑发育和意识复杂性的前景,在这方面可以提出这样的观点,即他的观点很可能在神经科学中找到其最重要的应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d546/9111979/8d641f61c1cf/fcell-10-871950-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d546/9111979/445f29c86576/fcell-10-871950-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d546/9111979/8d641f61c1cf/fcell-10-871950-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d546/9111979/445f29c86576/fcell-10-871950-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d546/9111979/8d641f61c1cf/fcell-10-871950-g002.jpg

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