Department of Biomedical Engineering, Rutgers, The State University of New Jersey, Piscataway, NJ, 08854, USA.
Department of Chemical and Biological Engineering, Princeton University, Princeton, NJ, 08544, USA.
Adv Mater. 2022 Jul;34(30):e2201809. doi: 10.1002/adma.202201809. Epub 2022 Jun 11.
Polymer-protein hybrids are intriguing materials that can bolster protein stability in non-native environments, thereby enhancing their utility in diverse medicinal, commercial, and industrial applications. One stabilization strategy involves designing synthetic random copolymers with compositions attuned to the protein surface, but rational design is complicated by the vast chemical and composition space. Here, a strategy is reported to design protein-stabilizing copolymers based on active machine learning, facilitated by automated material synthesis and characterization platforms. The versatility and robustness of the approach is demonstrated by the successful identification of copolymers that preserve, or even enhance, the activity of three chemically distinct enzymes following exposure to thermal denaturing conditions. Although systematic screening results in mixed success, active learning appropriately identifies unique and effective copolymer chemistries for the stabilization of each enzyme. Overall, this work broadens the capabilities to design fit-for-purpose synthetic copolymers that promote or otherwise manipulate protein activity, with extensions toward the design of robust polymer-protein hybrid materials.
聚合物-蛋白质杂化材料是一种很有前途的材料,它们可以在非天然环境中增强蛋白质的稳定性,从而提高其在医学、商业和工业等多种应用中的实用性。一种稳定化策略是设计与蛋白质表面组成相匹配的合成无规共聚物,但由于化学和组成空间的巨大,合理设计变得复杂。本研究报道了一种基于主动机器学习的蛋白质稳定化共聚物设计策略,该策略得益于自动化材料合成和表征平台的辅助。该方法的多功能性和稳健性通过成功鉴定出三种化学性质不同的酶在热变性条件下保持甚至提高活性的共聚物得到了证明。尽管系统筛选的结果喜忧参半,但主动学习适当地为每种酶鉴定出独特而有效的共聚物化学,以实现其稳定化。总的来说,这项工作拓宽了设计合适的合成共聚物的能力,以促进或操纵蛋白质的活性,并朝着设计稳健的聚合物-蛋白质杂化材料的方向扩展。