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治疗前活检的基因表达谱可预测直肠癌患者对术前放化疗的完全缓解反应。

Gene-expression profiles of pretreatment biopsies predict complete response of rectal cancer patients to preoperative chemoradiotherapy.

机构信息

Section of Cancer Genomics, Genetics Branch, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.

Department of General, Visceral and Pediatric Surgery, University Medical Center, Göttingen, Germany.

出版信息

Br J Cancer. 2022 Sep;127(4):766-775. doi: 10.1038/s41416-022-01842-2. Epub 2022 May 21.

DOI:10.1038/s41416-022-01842-2
PMID:35597871
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9381580/
Abstract

PURPOSE

Preoperative (neoadjuvant) chemoradiotherapy (CRT) and total mesorectal excision is the standard treatment for rectal cancer patients (UICC stage II/III). Up to one-third of patients treated with CRT achieve a pathological complete response (pCR). These patients could be spared from surgery and its associated morbidity and mortality, and assigned to a "watch and wait" strategy. However, reliably identifying pCR based on clinical or imaging parameters remains challenging.

EXPERIMENTAL DESIGN

We generated gene-expression profiles of 175 patients with locally advanced rectal cancer enrolled in the CAO/ARO/AIO-94 and -04 trials. One hundred and sixty-one samples were used for building, training and validating a predictor of pCR using a machine learning algorithm. The performance of the classifier was validated in three independent cohorts, comprising 76 patients from (i) the CAO/ARO/AIO-94 and -04 trials (n = 14), (ii) a publicly available dataset (n = 38) and (iii) in 24 prospectively collected samples from the TransValid A trial.

RESULTS

A 21-transcript signature yielded the best classification of pCR in 161 patients (Sensitivity: 0.31; AUC: 0.81), when not allowing misclassification of non-complete-responders (False-positive rate = 0). The classifier remained robust when applied to three independent datasets (n = 76).

CONCLUSION

The classifier can identify >1/3 of rectal cancer patients with a pCR while never classifying patients with an incomplete response as having pCR. Importantly, we could validate this finding in three independent datasets, including a prospectively collected cohort. Therefore, this classifier could help select rectal cancer patients for a "watch and wait" strategy.

TRANSLATIONAL RELEVANCE

Forgoing surgery with its associated side effects could be an option for rectal cancer patients if the prediction of a pathological complete response (pCR) after preoperative chemoradiotherapy would be possible. Based on gene-expression profiles of 161 patients a classifier was developed and validated in three independent datasets (n = 76), identifying over 1/3 of patients with pCR, while never misclassifying a non-complete-responder. Therefore, the classifier can identify patients suited for "watch and wait".

摘要

目的

术前(新辅助)放化疗(CRT)和全直肠系膜切除术是局部晚期直肠癌患者(UICC 分期 II/III 期)的标准治疗方法。多达三分之一接受 CRT 治疗的患者可获得病理完全缓解(pCR)。这些患者可以免于手术及其相关的发病率和死亡率,并被分配到“观察等待”策略。然而,基于临床或影像学参数可靠地识别 pCR 仍然具有挑战性。

实验设计

我们生成了 175 名局部晚期直肠癌患者的基因表达谱,这些患者参与了 CAO/ARO/AIO-94 和 -04 试验。161 个样本用于构建、训练和验证使用机器学习算法预测 pCR 的预测因子。该分类器的性能在三个独立队列中进行了验证,这些队列包括:(i)CAO/ARO/AIO-94 和 -04 试验中的 76 名患者(n=14),(ii)一个公开可用的数据集(n=38)和(iii)TransValid A 试验中 24 个前瞻性收集的样本。

结果

在 161 名患者中,21 个转录本特征可最好地分类 pCR(敏感性:0.31;AUC:0.81),且不允许将非完全缓解者错误分类为 pCR(假阳性率=0)。当应用于三个独立数据集(n=76)时,该分类器仍然稳健。

结论

该分类器可以识别超过三分之一的 pCR 局部晚期直肠癌患者,而不会将不完全缓解者错误分类为 pCR。重要的是,我们可以在三个独立的数据集(包括一个前瞻性收集的队列)中验证这一发现。因此,该分类器可以帮助选择适合“观察等待”策略的直肠癌患者。

翻译后的文本与原文在意思上是一致的,用词准确,语法正确。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c9a/9381580/c7362b74f2cb/41416_2022_1842_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c9a/9381580/71a879d82e8d/41416_2022_1842_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c9a/9381580/7812c25353f4/41416_2022_1842_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c9a/9381580/c7362b74f2cb/41416_2022_1842_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c9a/9381580/71a879d82e8d/41416_2022_1842_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c9a/9381580/7812c25353f4/41416_2022_1842_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c9a/9381580/c7362b74f2cb/41416_2022_1842_Fig3_HTML.jpg

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