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隐藏的生化化石揭示了前生物时代糖酵解的进化轨迹。

Hidden biochemical fossils reveal an evolutionary trajectory for glycolysis in the prebiotic era.

机构信息

Theoretical Biology Research Group, Budapest, Hungary.

Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies, Bari, Italy.

出版信息

FEBS Lett. 2022 Aug;596(15):1955-1968. doi: 10.1002/1873-3468.14408. Epub 2022 Jun 9.

DOI:10.1002/1873-3468.14408
PMID:35599367
Abstract

Glycolysis is present in nearly all organisms alive today. This article proposes an evolutionary trajectory for the development of glycolysis in the framework of the chemoautotrophic theory for the origin of life. In the proposal, trioses and triose-phosphates were appointed to starting points. The six-carbon and the three-carbon intermediates developed in the direction of gluconeogenesis and glycolysis, respectively, differing from the from-bottom-to-up development of enzymatic glycolysis. The examination of enzymatic reaction mechanisms revealed that the enzymes incorporated chemical mechanisms of the nonenzymatic stage, making possible to identify kinship between glyoxalases and glyceraldehyde 3-phosphate dehydrogenase as well as methylglyoxal synthase and triose-phosphate isomerase. This developmental trajectory may shed light on how glycolysis might have developed in the nonenzymatic era.

摘要

糖酵解几乎存在于当今所有生物中。本文在生命起源的化能自养理论框架内,提出了糖酵解在进化过程中的发展轨迹。在该提议中,指定了丙糖和丙糖磷酸作为起点。六碳和三碳中间产物分别朝着糖异生和糖酵解的方向发展,与酶促糖酵解的自下而上的发展不同。对酶促反应机制的研究表明,这些酶结合了非酶促阶段的化学机制,使醛缩酶和甘油醛-3-磷酸脱氢酶以及甲基乙二醛合酶和磷酸丙糖异构酶之间存在亲缘关系成为可能。这种发展轨迹可能揭示了糖酵解在非酶促时代是如何发展的。

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1
Hidden biochemical fossils reveal an evolutionary trajectory for glycolysis in the prebiotic era.隐藏的生化化石揭示了前生物时代糖酵解的进化轨迹。
FEBS Lett. 2022 Aug;596(15):1955-1968. doi: 10.1002/1873-3468.14408. Epub 2022 Jun 9.
2
Reaction of triosephosphate isomerase with L-glyceraldehyde 3-phosphate and triose 1,2-enediol 3-phosphate.磷酸丙糖异构酶与3-磷酸-L-甘油醛及3-磷酸丙糖1,2-烯二醇的反应。
Biochemistry. 1985 Feb 12;24(4):949-53. doi: 10.1021/bi00325a021.
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Prebiotic synthesis of phosphoenol pyruvate by α-phosphorylation-controlled triose glycolysis.通过α-磷酸化控制的三碳糖酵解合成磷酸烯醇丙酮酸。
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The active chemical state of D-glyceraldehyde 3-phosphate in its reactions with D-glyceraldehyde 3-phosphate dehydrogenase, aldolase and triose phosphate isomerase.D-甘油醛3-磷酸在与D-甘油醛3-磷酸脱氢酶、醛缩酶和磷酸丙糖异构酶反应中的活性化学状态。
Biochem J. 1969 Aug;114(1):19-24. doi: 10.1042/bj1140019.
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The formation of methylglyoxal from triose phosphates. Investigation using a specific assay for methylglyoxal.由磷酸丙糖生成甲基乙二醛。使用甲基乙二醛特异性检测法进行的研究。
Eur J Biochem. 1993 Feb 15;212(1):101-5. doi: 10.1111/j.1432-1033.1993.tb17638.x.
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Phosphonomethyl analogues of phosphate ester glycolytic intermediates.磷酸酯糖酵解中间体的膦酰甲基类似物。
Biochem J. 1974 Sep;141(3):715-9. doi: 10.1042/bj1410715.
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Mode of action of alpha-chlorohydrin as a male anti-fertility agent. Inhibition of the metabolism of ram spermatozoa by alpha-chlorohydrin and location of block in glycolysis.α-氯醇作为男性抗生育剂的作用方式。α-氯醇对公羊精子代谢的抑制作用及糖酵解阻断部位。
Biochem J. 1978 Jan 15;170(1):23-37. doi: 10.1042/bj1700023.
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Combined glyceraldehyde-3-phosphate dehydrogenase/phosphoglycerate kinase in catecholamine-stimulated guinea-pig cardiac muscle. Comparison with mass-action ratio of creatine kinase.儿茶酚胺刺激的豚鼠心肌中甘油醛-3-磷酸脱氢酶/磷酸甘油酸激酶的联合作用。与肌酸激酶质量作用比的比较。
Eur J Biochem. 1991 Dec 18;202(3):913-21. doi: 10.1111/j.1432-1033.1991.tb16451.x.
9
Free-energy profile of the reaction catalyzed by triosephosphate isomerase.磷酸丙糖异构酶催化反应的自由能剖面图。
Biochemistry. 1976 Dec 14;15(25):5627-31. doi: 10.1021/bi00670a031.
10
The indirect binding of triose-phosphate isomerase to myofibrils to form a glycolytic enzyme mini-complex.磷酸丙糖异构酶与肌原纤维的间接结合,形成一种糖酵解酶小复合体。
Biochim Biophys Acta. 1986 Sep 5;873(1):127-35. doi: 10.1016/0167-4838(86)90198-6.

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