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PDK4是胃癌中一种新型的预后生物标志物和治疗靶点。

PDK4 Constitutes a Novel Prognostic Biomarker and Therapeutic Target in Gastric Cancer.

作者信息

Zhang Zimu, Han Shiyuan, Ouyang Siwen, Zeng Ziyang, Liu Zhen, Sun Juan, Kang Weiming

机构信息

Department of General Surgery, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100730, China.

Department of Neurosurgery, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100730, China.

出版信息

Diagnostics (Basel). 2022 Apr 27;12(5):1101. doi: 10.3390/diagnostics12051101.

DOI:10.3390/diagnostics12051101
PMID:35626257
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9139696/
Abstract

Gastric cancer (GC) is one of the most prevalent and deadly malignancies worldwide. We aimed to assess the functional role and clinical significance of pyruvate dehydrogenase kinase (PDK) in GC and explored the underlying mechanisms. The bioinformatics method was used to investigate the expression of PDKs in GC, the effect on clinical outcomes, enriched pathways, interactive network, and the correlation between PDK4 and immune infiltration. Next, PDK expression in the GC cells and tissues were verified by qRT-PCR and western blotting. A Cell Counting Kit-8 (CCK8), colony-formation, Flow cytometry, Transwell and wound healing assays were carried out to evaluate the influence of PDK4 on cell proliferation, invasion and migration. Among PDKs, PDK4 expression was aberrant in GC and identified as an independent prognostic factor. GO analysis, GSEA, and PPI showed that PDK4 expression may regulate cell adhesion, metal ion transport, synaptic activity, and cancer cell metabolism in GC. Analyses of immune infiltration showed that PDK4 correlated with the abundant expression of various immunocytes. Finally, we verified that upregulation of PDK4 expression enhanced the ability of GC cells to proliferate, migrate, and invade. In conclusion, PDK4 was identified as a potential candidate diagnostic biomarker and therapeutic target for GC patients.

摘要

胃癌(GC)是全球最常见且致命的恶性肿瘤之一。我们旨在评估丙酮酸脱氢酶激酶(PDK)在胃癌中的功能作用和临床意义,并探索其潜在机制。采用生物信息学方法研究PDKs在胃癌中的表达、对临床结局的影响、富集通路、相互作用网络以及PDK4与免疫浸润之间的相关性。接下来,通过qRT-PCR和蛋白质免疫印迹法验证胃癌细胞和组织中PDK的表达。进行细胞计数试剂盒-8(CCK8)、集落形成、流式细胞术、Transwell和伤口愈合试验,以评估PDK4对细胞增殖、侵袭和迁移的影响。在PDKs中,PDK4在胃癌中的表达异常,并被确定为独立的预后因素。基因本体(GO)分析、基因集富集分析(GSEA)和蛋白质-蛋白质相互作用(PPI)表明,PDK4的表达可能调节胃癌中的细胞黏附、金属离子转运、突触活性和癌细胞代谢。免疫浸润分析表明,PDK4与多种免疫细胞的丰富表达相关。最后,我们证实PDK4表达上调增强了胃癌细胞的增殖、迁移和侵袭能力。总之,PDK4被确定为胃癌患者潜在的候选诊断生物标志物和治疗靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b4e/9139696/fe51d1a1203b/diagnostics-12-01101-g012.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b4e/9139696/a062b7413de4/diagnostics-12-01101-g002.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b4e/9139696/be4e7938204f/diagnostics-12-01101-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b4e/9139696/bd70d077a121/diagnostics-12-01101-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b4e/9139696/a9747467cf58/diagnostics-12-01101-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b4e/9139696/d0d1cf5e1ed9/diagnostics-12-01101-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b4e/9139696/848d735761b2/diagnostics-12-01101-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b4e/9139696/b8edb86acfe5/diagnostics-12-01101-g010.jpg
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